RNA–Protein interactions for RNA: ENST00000598355.1

TRIM28-213, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-213ENST00000598355 PRKAG1P54619 331 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 PPP2R2AP63151 447 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 LASP1Q14847 261 aaKnown RBP14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SLC9B1Q4ZJI4 515 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SPANXN4Q5MJ08 99 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 VASNQ6EMK4 673 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 RTL6Q6ICC9 239 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SZRD1Q7Z422 152 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 MRGPRGQ86SM5 289 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 CLECL1Q8IZS7 167 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 FBXO30Q8TB52 745 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 GPR151Q8TDV0 419 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SLC9A6Q92581 669 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 C16orf58Q96GQ5 468 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 ACTRT3Q9BYD9 372 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 PRDM14Q9GZV8 571 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 PIGUQ9H490 435 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 SERHLQ9NQF3 203 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 TNFRSF10DQ9UBN6 386 aa14.69□□□□□ -0.06
TRIM28-213ENST00000598355 HEATR5AQ86XA9 2040 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 MED12LQ86YW9 2145 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 NAV2Q8IVL1 2488 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 GOLGA8QA0A0J9YX86 632 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 GOLGA8OA6NCC3 632 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 C2orf72A6NCS6 295 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 C17orf51A8MQB3 221 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 ALG1L2C9J202 215 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 GOLGA8NF8WBI6 632 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 SOX30O94993 753 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 UTS2O95399 124 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 ALOX5P09917 674 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 ACVR2AP27037 513 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 TRPC1P48995 793 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 MRPL19P49406 292 aaKnown RBP14.68□□□□□ -0.06
TRIM28-213ENST00000598355 SMSP52788 366 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 GFRA1P56159 465 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 CDSNQ15517 529 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 EIPR1Q53HC9 387 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 WLSQ5T9L3 541 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 APOOLQ6UXV4 268 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 ZAR1Q86SH2 424 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 GOT1L1Q8NHS2 421 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-213ENST00000598355 MIPOL1Q8TD10 442 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 BTBD2Q9BX70 525 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 SERHL2Q9H4I8 314 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 SLCO1B3Q9NPD5 702 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 FBXL2Q9UKC9 423 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 SNX8Q9Y5X2 465 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 USH1CQ9Y6N9 552 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 CENPEQ02224 2701 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 CELSR2Q9HCU4 2923 aa14.68□□□□□ -0.06
TRIM28-213ENST00000598355 PRSS51A0A1B0GVH4 220 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 CYSRT1A8MQ03 144 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 TGDSO95455 350 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 KRT16P08779 473 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 HOXD4P09016 255 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-213ENST00000598355 GABRA1P14867 456 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 IDO1P14902 403 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 ZFP36L2P47974 494 aaKnown RBP14.67□□□□□ -0.06
TRIM28-213ENST00000598355 UFM1P61960 85 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 TP53BP2Q13625 1128 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 PGS1Q32NB8 556 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 GRAMD1BQ3KR37 738 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 FAM174BQ3ZCQ3 159 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 PDCD4Q53EL6 469 aaKnown RBP14.67□□□□□ -0.06
TRIM28-213ENST00000598355 WIPI1Q5MNZ9 446 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-213ENST00000598355 DCST1Q5T197 706 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 ANXA8L1Q5VT79 327 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 TMEM211Q6ICI0 200 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 BHLHB9Q6PI77 547 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 EPGNQ6UW88 154 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 ULK2Q8IYT8 1036 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 GOLGA6L1Q8N7Z2 621 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 COX18Q8N8Q8 333 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 OR2M3Q8NG83 312 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 OR5M9Q8NGP3 310 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 LRRC8CQ8TDW0 803 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 STON2Q8WXE9 905 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 DTNBP1Q96EV8 351 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 CCDC115Q96NT0 180 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 OR52B2Q96RD2 323 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 TIMP4Q99727 224 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 UGT2B28Q9BY64 529 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 EXO5Q9H790 373 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 SDR39U1Q9NRG7 319 aaPredicted RBP14.67□□□□□ -0.06
TRIM28-213ENST00000598355 ZNF446Q9NWS9 450 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 BTNL2Q9UIR0 455 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 ACAD8Q9UKU7 415 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 MAST4O15021 2626 aa14.67□□□□□ -0.06
TRIM28-213ENST00000598355 A0A1W2PQD3 144 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 SCO2O43819 266 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 TRAPPC6AO75865 159 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 OXSR1O95747 527 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-213ENST00000598355 ACTL6AO96019 429 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 BMP7P18075 431 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 TBXA2RP21731 343 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 PTGER4P35408 488 aa14.66□□□□□ -0.06
TRIM28-213ENST00000598355 POU6F2P78424 691 aaPredicted RBP14.66□□□□□ -0.06
TRIM28-213ENST00000598355 GANABQ14697 944 aaKnown RBP14.66□□□□□ -0.06
TRIM28-213ENST00000598355 GSTA3Q16772 222 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms