RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KCNK2O95069 426 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 DDX5P17844 614 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 ACVR2AP27037 513 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 GRNP28799 593 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 IL12AP29459 219 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 RFX3P48380 749 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 CCT3P49368 545 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 PRR5P85299 388 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 LASP1Q14847 261 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 GRAMD1BQ3KR37 738 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 VPS26BQ4G0F5 336 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 SLC9B1Q4ZJI4 515 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 NHSL2Q5HYW2 709 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 WIPI1Q5MNZ9 446 aaPredicted RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 VASNQ6EMK4 673 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF585AQ6P3V2 769 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 APOOLQ6UXV4 268 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 YRDCQ86U90 279 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 PLCZ1Q86YW0 608 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 CLEC4FQ8N1N0 589 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 NATD1Q8N6N6 113 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 OR5AK3PQ8NH89 298 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 PIWIL2Q8TC59 973 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 SFXN5Q8TD22 340 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 SARAFQ96BY9 339 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 DPY30Q9C005 99 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 OR2B2Q9GZK3 357 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 SERHL2Q9H4I8 314 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 EXO5Q9H790 373 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 SLCO1B3Q9NPD5 702 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 FAM120CQ9NX05 1096 aaKnown RBP10□□□□□ -0.81
SHKBP1-206ENST00000595523 ACAD8Q9UKU7 415 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 ABCG2Q9UNQ0 655 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 SNX8Q9Y5X2 465 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 GPR45Q9Y5Y3 372 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 KCNE3Q9Y6H6 103 aa10□□□□□ -0.81
SHKBP1-206ENST00000595523 C15orf38-AP3S2A0A0A6YYH1 394 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 TRPC5OSA6NMA1 111 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 HMGB1P1B2RPK0 211 aaPredicted RBP9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 CBR3O75828 277 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 KCNH1O95259 989 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 UTS2O95399 124 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 C1QCP02747 245 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ALOX5P09917 674 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 BMP7P18075 431 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 AGAP20933 346 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 DCTP40126 519 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 KIR3DL1P43629 444 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 PRIM2P49643 509 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 NME5P56597 212 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 NUP107P57740 925 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 UFM1P61960 85 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ART3Q13508 389 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 TP53BP2Q13625 1128 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 TOMM20Q15388 145 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 LSM12Q3MHD2 195 aaKnown RBP9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 FAM174BQ3ZCQ3 159 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 SPANXN4Q5MJ08 99 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 CCNJQ5T5M9 372 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF787Q6DD87 383 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 CDC73Q6P1J9 531 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ZCCHC12Q6PEW1 402 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 FIGNL1Q6PIW4 674 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 XKRXQ6PP77 449 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 SEM1Q6ZVN7 128 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 MARCH3Q86UD3 253 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ANKRD46Q86W74 232 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ULK2Q8IYT8 1036 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 FADS6Q8N9I5 356 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 OR56A1Q8NGH5 318 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 OR4C3Q8NH37 302 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ACTRT2Q8TDY3 377 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 JADE3Q92613 823 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 CDS1Q92903 461 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 MARK4Q96L34 752 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 C7orf26Q96N11 449 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 OR52B2Q96RD2 323 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 TIMP4Q99727 224 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 TTYH2Q9BSA4 534 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 UGT2B28Q9BY64 529 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 PIGUQ9H490 435 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 DUSP22Q9NRW4 184 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 ZNF446Q9NWS9 450 aa9.99□□□□□ -0.81
SHKBP1-206ENST00000595523 PDZD2O15018 2839 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 PRSS44E7EML9 344 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 E9PBE3 544 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 SLCO1B7G3V0H7 640 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 CFLARO15519 480 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 ZIC3O60481 467 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 WDR1O75083 606 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 OXSR1O95747 527 aaPredicted RBP9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 NGFRP08138 427 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 GLI4P10075 376 aa9.98□□□□□ -0.81
SHKBP1-206ENST00000595523 SRD5A2P31213 254 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms