RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 KCNH1O95259 989 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 ACP2P11117 423 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 COX6B1P14854 86 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 BMP7P18075 431 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 SRD5A2P31213 254 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 GABRA3P34903 492 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 GCKP35557 465 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 ADH7P40394 386 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 RFX3P48380 749 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 SLC18A1P54219 525 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 PSMD4P55036 377 aaKnown RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 PRR5P85299 388 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 TESK1Q15569 626 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 ACSF3Q4G176 576 aaPredicted RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 EXOSC6Q5RKV6 272 aaKnown RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 NATD1Q8N6N6 113 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 LILRB4Q8NHJ6 448 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 GPR151Q8TDV0 419 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 PIK3R3Q92569 461 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 FAM120BQ96EK7 910 aaKnown RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 DTNBP1Q96EV8 351 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 RMND5BQ96G75 393 aaPredicted RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 DOCK7Q96N67 2140 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 AKTIPQ9H8T0 292 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 TMBIM4Q9HC24 238 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 ZCCHC3Q9NUD5 404 aaKnown RBP13.74□□□□□ -0.21
TRIM28-205ENST00000595028 FBXL2Q9UKC9 423 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 KIAA1549Q9HCM3 1950 aa13.74□□□□□ -0.21
TRIM28-205ENST00000595028 A0A0G2JNJ9 132 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 A0A1W2PRB8 838 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 FAM47E-STBD1D6RA91 191 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 ACTL6AO96019 429 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 IGKV1D-16P01601 117 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 PRKAG1P54619 331 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 MAGOHP61326 146 aaKnown RBP13.73□□□□□ -0.21
TRIM28-205ENST00000595028 RIPPLY2Q5TAB7 128 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 CAMKMTQ7Z624 323 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 IFNEQ86WN2 208 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 PM20D2Q8IYS1 436 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 ACBD4Q8NC06 268 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 SLC16A11Q8NCK7 471 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 OR4K17Q8NGC6 315 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 OR10Q1Q8NGQ4 319 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 OR14L1PQ8NHC6 308 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 MGARPQ8TDB4 240 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 NUDT8Q8WV74 236 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 OR5P2Q8WZ92 322 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 SLC9A6Q92581 669 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 ABTB1Q969K4 478 aaPredicted RBP13.73□□□□□ -0.21
TRIM28-205ENST00000595028 COQ8BQ96D53 544 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 PRPF18Q99633 342 aaKnown RBP13.73□□□□□ -0.21
TRIM28-205ENST00000595028 NUF2Q9BZD4 464 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 BHLHE41Q9C0J9 482 aaPredicted RBP13.73□□□□□ -0.21
TRIM28-205ENST00000595028 NEUROD4Q9HD90 331 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 PPP4R1LQ9P1A2 415 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 Q9UFV3 132 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 DKKL1Q9UK85 242 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 CAMK2AQ9UQM7 478 aa13.73□□□□□ -0.21
TRIM28-205ENST00000595028 NKX2-6A6NCS4 301 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 UTS2O95399 124 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 C6orf47O95873 294 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 KIR3DL1P43629 444 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 ZFP36L2P47974 494 aaKnown RBP13.72□□□□□ -0.21
TRIM28-205ENST00000595028 PRIM2P49643 509 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 DIO3P55073 304 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 CLDN8P56748 225 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 TFF3Q07654 80 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 STX5Q13190 355 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 CASP8Q14790 479 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 DUSP5Q16690 384 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 ZCCHC12Q6PEW1 402 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 SEM1Q6ZVN7 128 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 LACC1Q8IV20 430 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 LRRC34Q8IZ02 419 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 COX18Q8N8Q8 333 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 FADS6Q8N9I5 356 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 OR56A1Q8NGH5 318 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 JADE3Q92613 823 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 C16orf58Q96GQ5 468 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 WDYHV1Q96HA8 205 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 DUSP26Q9BV47 211 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 UCK2Q9BZX2 261 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 CXorf36Q9H7Y0 433 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 MEAF6Q9HAF1 191 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 NKIRAS1Q9NYS0 192 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 TAS2R10Q9NYW0 307 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 SNX8Q9Y5X2 465 aa13.72□□□□□ -0.21
TRIM28-205ENST00000595028 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.21
TRIM28-205ENST00000595028 KDM4EB2RXH2 506 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-205ENST00000595028 SNNO75324 88 aaPredicted RBP13.71□□□□□ -0.21
TRIM28-205ENST00000595028 TOXO94900 526 aa13.71□□□□□ -0.21
TRIM28-205ENST00000595028 EPPINO95925 133 aa13.71□□□□□ -0.21
TRIM28-205ENST00000595028 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
TRIM28-205ENST00000595028 SNRPB2P08579 225 aaKnown RBP13.71□□□□□ -0.21
TRIM28-205ENST00000595028 ALOX5P09917 674 aa13.71□□□□□ -0.21
TRIM28-205ENST00000595028 DPP4P27487 766 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms