RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 DUS2Q9NX74 493 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 RCE1Q9Y256 329 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 ZNF705FA8MVS1 300 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 GAPDHSO14556 408 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 AGPAT2O15120 278 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 ZNF705DP0CH99 300 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 ZNF705BP0CI00 300 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 NOVP48745 357 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 ZXDBP98169 803 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 AMZ1Q400G9 498 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 SMPDL3BQ92485 455 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 MTHFD2LQ9H903 347 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 AKIP1Q9NQ31 210 aa13.84□□□□□ -0.19
SMARCA4-214ENST00000589677 ROBO1Q9Y6N7 1651 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 ADAM23O75077 832 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 HRH2P25021 359 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 CRYZQ08257 329 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 TDGQ13569 410 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.83□□□□□ -0.195e-10■■■□□ 16.7
SMARCA4-214ENST00000589677 SSX9Q7RTT3 188 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 COMMD6Q7Z4G1 85 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 TRIM46Q7Z4K8 759 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 FAM124AQ86V42 546 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 SUMF2Q8NBJ7 301 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 ST8SIA4Q92187 359 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 IGSF8Q969P0 613 aa13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 SLC25A44Q96H78 314 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-214ENST00000589677 H7BY64 318 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 RAD51DO75771 328 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 SORDQ00796 357 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 TMEM35AQ53FP2 167 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 Q6ZVU0 165 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF534Q76KX8 674 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 GPAT4Q86UL3 456 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 OR4C15Q8NGM1 316 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 OR2T4Q8NH00 348 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 OVCA2Q8WZ82 227 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 PRAP1Q96NZ9 151 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF587Q96SQ5 575 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 MICU1Q9BPX6 476 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 SRPX2O60687 465 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 TSSK4Q6SA08 328 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 RASGRP3Q8IV61 690 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 PRRC1Q96M27 445 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 HAPLN2Q9GZV7 340 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 TMPRSS11EQ9UL52 423 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 RPH3AQ9Y2J0 694 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 V9GY05 133 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 GGT3PA6NGU5 568 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 PPP6CO00743 305 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 WNT7BP56706 349 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 ISL1P61371 349 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 NOGQ13253 232 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 RBMS2Q15434 407 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 CRTC1Q6UUV9 634 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 STEAP2Q8NFT2 490 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 SMARCD2Q92925 531 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 SDHAF2Q9NX18 166 aa13.83□□□□□ -0.2
SMARCA4-214ENST00000589677 MUSKO15146 869 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 CCL16O15467 120 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ADAM12O43184 909 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 TSPAN6O43657 245 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 UBL3O95164 117 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 GP2P55259 537 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 SIGIRRQ6IA17 410 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 MAMDC4Q6UXC1 1216 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 C10orf90Q96M02 699 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 SYT3Q9BQG1 590 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 SRA1Q9HD15 236 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 RPS10-NUDT3A0A1W2PQS6 291 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 RPS10P46783 165 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 MTNR1BP49286 362 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 PSPHP78330 225 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 RPS26P11Q5JNZ5 115 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ZER1Q7Z7L7 766 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 SLC22A8Q8TCC7 542 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 DYNC2LI1Q8TCX1 351 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 GLYATL1Q969I3 302 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 FYTTD1Q96QD9 318 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 OR14A2Q96R54 314 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 DDX31Q9H8H2 851 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ATP13A2Q9NQ11 1180 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ZNF226Q9NYT6 803 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 GMPR2Q9P2T1 348 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 A0A0A6YYH2 397 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 A6NJ64 397 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 LDB2O43679 373 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 RAB6AP20340 208 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 ETV3P41162 512 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 TAS2R19P59542 299 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 TP53I3Q53FA7 332 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 LRIF1Q5T3J3 769 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 PAPD4Q6PIY7 484 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 TMEM107Q6UX40 140 aa13.82□□□□□ -0.2
SMARCA4-214ENST00000589677 CCDC71Q8IV32 467 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms