RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TIA1P31483 386 aaKnown RBP eCLIP16.12■□□□□ 0.17
MKS1-209ENST00000580127 NR1H2P55055 460 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 PKNOX1P55347 436 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 CTBP2P56545 445 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 CLDN15P56746 228 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 BEX5Q5H9J7 111 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 GTF2IRD2BQ6EKJ0 949 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 GALNT18Q6P9A2 607 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 NPSR1Q6W5P4 371 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 GTF2IRD2Q86UP8 949 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 STK32CQ86UX6 486 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 MMGT1Q8N4V1 131 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 OR7G2Q8NG99 324 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 OR4N2Q8NGD1 307 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 FNDC9Q8TBE3 224 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 GSX2Q9BZM3 304 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 CXorf56Q9H5V9 222 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 DMGDHQ9UI17 866 aaKnown RBP16.12■□□□□ 0.17
MKS1-209ENST00000580127 C19orf53Q9UNZ5 99 aaPredicted RBP16.12■□□□□ 0.17
MKS1-209ENST00000580127 HEATR5AQ86XA9 2040 aa16.12■□□□□ 0.17
MKS1-209ENST00000580127 A0A087WUV0 522 aaPredicted RBP16.11■□□□□ 0.17
MKS1-209ENST00000580127 OR2M5A3KFT3 312 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 MYO1GB0I1T2 1018 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 CGAP01215 116 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 DDCP20711 480 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 NTSP30990 170 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 NCBP2P52298 156 aaKnown RBP eCLIP16.11■□□□□ 0.17
MKS1-209ENST00000580127 PSG6Q00889 435 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 BTKQ06187 659 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 STX5Q13190 355 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 ZNF678Q5SXM1 525 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 PPP4R4Q6NUP7 873 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 C1GALT1C1Q96EU7 318 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 ACPTQ9BZG2 426 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 PLSCR4Q9NRQ2 329 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 GLRX2Q9NS18 164 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 DDX18Q9NVP1 670 aaKnown RBP16.11■□□□□ 0.17
MKS1-209ENST00000580127 SIRT5Q9NXA8 310 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 TAS2R7Q9NYW3 318 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 ZNF225Q9UK10 706 aa16.11■□□□□ 0.17
MKS1-209ENST00000580127 MCTS1Q9ULC4 181 aaKnown RBP16.11■□□□□ 0.17
MKS1-209ENST00000580127 NME6O75414 186 aaPredicted RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 KCNH1O95259 989 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 CNOT4O95628 575 aaKnown RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 IL33O95760 270 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 JUNP05412 331 aaKnown RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 ATP5F1P24539 256 aaPredicted RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 SUCLG1P53597 346 aaKnown RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 NAA20P61599 178 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 RAE1P78406 368 aaKnown RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 ZNF763Q0D2J5 394 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 LCP2Q13094 533 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 EXOC3L2Q2M3D2 409 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 VPS26BQ4G0F5 336 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 UNC50Q53HI1 259 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 PDSS1Q5T2R2 415 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 ANKRD34AQ69YU3 496 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 ZNF550Q7Z398 422 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 IFT81Q8WYA0 676 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 CDC42EP4Q9H3Q1 356 aaKnown RBP16.1■□□□□ 0.17
MKS1-209ENST00000580127 TLN2Q9Y4G6 2542 aa16.1■□□□□ 0.17
MKS1-209ENST00000580127 FN1P02751 2386 aaKnown RBP16.09■□□□□ 0.17
MKS1-209ENST00000580127 SIAH2O43255 324 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 SYNGR4O95473 234 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 CHN1P15882 459 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 RFX3P48380 749 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 PTH2RP49190 550 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 CLDN20P56880 219 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 IMPG1Q17R60 797 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 TCHHL1Q5QJ38 904 aaPredicted RBP16.09■□□□□ 0.17
MKS1-209ENST00000580127 BEND4Q6ZU67 534 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 SH2D5Q6ZV89 423 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 MARCH3Q86UD3 253 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 WDR75Q8IWA0 830 aaKnown RBP16.09■□□□□ 0.17
MKS1-209ENST00000580127 CIARTQ8N365 385 aaPredicted RBP16.09■□□□□ 0.17
MKS1-209ENST00000580127 TMEM151AQ8N4L1 468 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 METTL25Q8N6Q8 603 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 OR6K3Q8NGY3 331 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 DCAKDQ8WVC6 231 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 APIPQ96GX9 242 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 GMPPAQ96IJ6 420 aaPredicted RBP16.09■□□□□ 0.17
MKS1-209ENST00000580127 FMO2Q99518 471 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 ROS1P08922 2347 aa16.09■□□□□ 0.17
MKS1-209ENST00000580127 CSPG4Q6UVK1 2322 aa16.08■□□□□ 0.17
MKS1-209ENST00000580127 PCNX3Q9H6A9 2034 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 A0A087WZY1 265 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 SERTM1A2A2V5 107 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 H3BQF6 201 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 IL11P20809 199 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 GABRA3P34903 492 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 EIF1AXP47813 144 aaKnown RBP16.08■□□□□ 0.16
MKS1-209ENST00000580127 TMEM107Q6UX40 140 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 TIFABQ6ZNK6 161 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 EXOC3L1Q86VI1 746 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 OR5M1Q8NGP8 315 aa16.08■□□□□ 0.16
MKS1-209ENST00000580127 CEP70Q8NHQ1 597 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms