RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CHST10O43529 356 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ASNA1O43681 348 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SOX30O94993 753 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MT-ND1P03886 318 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 BCHEP06276 602 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 STSP08842 583 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MSL3P1P0C860 447 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 COX6B1P14854 86 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 UQCRBP14927 111 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 NT5EP21589 574 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 AQP1P29972 269 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MC3RP41968 323 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 CLCN2P51788 898 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 CRISP3P54108 245 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ARSFP54793 590 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 CASP9P55211 416 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SELENOWP63302 87 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SLC13A2Q13183 592 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 IFI44LQ53G44 452 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SFT2D3Q587I9 215 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 HMBOX1Q6NT76 420 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 PPP4R4Q6NUP7 873 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 TLDC1Q6P9B6 456 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SLC44A2Q8IWA5 706 aaPredicted RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 CBR4Q8N4T8 237 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 HORMAD2Q8N7B1 307 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 OR1N1Q8NGS0 311 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 OR9A2Q8NGT5 310 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 BBS10Q8TAM1 723 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ADAMTS15Q8TE58 950 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 XAGE5Q8WWM1 108 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 PROX1Q92786 737 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ELP4Q96EB1 424 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MVB12AQ96EY5 273 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MMABQ96EY8 250 aaPredicted RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 THOC3Q96J01 351 aaKnown RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 LURAP1Q96LR2 239 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ZNF681Q96N22 645 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ZNF285Q96NJ3 590 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 MS4A4EQ96PG1 132 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ZNF347Q96SE7 839 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 PELOQ9BRX2 385 aaKnown RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 OSBPL11Q9BXB4 747 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 OSBPL10Q9BXB5 764 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 ACTRT3Q9BYD9 372 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 OR51I1Q9H343 314 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 IL1RAPQ9NPH3 570 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 CUTCQ9NTM9 273 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 SH3BGRL2Q9UJC5 107 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 OAZ3Q9UMX2 235 aa9.43□□□□□ -0.9
SS18-210ENST00000578700 FAM32AQ9Y421 112 aaKnown RBP9.43□□□□□ -0.9
SS18-210ENST00000578700 FITM1A5D6W6 292 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 M0QX08 132 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 PLOD2O00469 737 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 CYR61O00622 381 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 DYRK3O43781 588 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 COQ9O75208 318 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 RASAL1O95294 804 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 ATP1B1P05026 303 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 HMGN2P05204 90 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 IFI6P09912 130 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 TFPTP0C1Z6 253 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 SLC35E2P0CK97 266 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 OR12D1P0DN82 309 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 SOX8P57073 446 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 RPS26P62854 115 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 FOLH1Q04609 750 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 EPS8Q12929 822 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 LASP1Q14847 261 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 NRF1Q16656 503 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 ZNF750Q32MQ0 723 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 VWA2Q5GFL6 755 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 SWT1Q5T5J6 900 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 PRAMEF8Q5VWM4 474 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 PRAMEF7Q5VXH5 474 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 TTLL10Q6ZVT0 673 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 PRSS41Q7RTY9 318 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 C16orf62Q7Z3J2 963 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 GDF7Q7Z4P5 450 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 MRGPRGQ86SM5 289 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 HIPK1Q86Z02 1210 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 ARMC8Q8IUR7 673 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 OR4N5Q8IXE1 308 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 KBTBD2Q8IY47 623 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 FAM86B1Q8N7N1 296 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 BCORP1Q8N888 145 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 OR5T3Q8NGG3 340 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 SUN3Q8TAQ9 357 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 MIPOL1Q8TD10 442 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 GEMIN6Q8WXD5 167 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 RAB8BQ92930 207 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 UCN3Q969E3 161 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 TMBIM1Q969X1 311 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 RBM18Q96H35 190 aaKnown RBP9.42□□□□□ -0.9
SS18-210ENST00000578700 TMEM19Q96HH6 336 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 C10orf90Q96M02 699 aa9.42□□□□□ -0.9
SS18-210ENST00000578700 NR1H4Q96RI1 486 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms