RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RNF144AP50876 292 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 BTG1P62324 171 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 BAK1Q16611 211 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TP53I3Q53FA7 332 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 MLIPQ5VWP3 458 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TIGD3Q6B0B8 471 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 FAM124AQ86V42 546 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 TPRA1Q86W33 373 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 HORMAD2Q8N7B1 307 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR6F1Q8NGZ6 308 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF582Q96NG8 517 aaPredicted RBP12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 COPS3Q9UNS2 423 aa12.39□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACOT7O00154 380 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CASC3O15234 703 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CDC40O60508 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 UBXN7O94888 489 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CD6P30203 668 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 AHRP35869 848 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 FRKP42685 505 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 USF2Q15853 346 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 COX20Q5RI15 118 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 KIAA1324Q6UXG2 1013 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 NANOGP1Q8N7R0 232 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR52I1Q8NGK6 324 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR4K13Q8NH42 304 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 MAFIPQ8WZ33 124 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 HS6ST2Q96MM7 605 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 PINK1Q9BXM7 581 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 EGLN3Q9H6Z9 239 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SYNPO2LQ9H987 977 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 MUTYHQ9UIF7 546 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC45A1Q9Y2W3 748 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 NME7Q9Y5B8 376 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 TRAPPC13A5PLN9 417 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 MAS1P04201 325 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ASGR2P07307 311 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR4C11Q6IEV9 310 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 IDO2Q6ZQW0 420 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 TMEM173Q86WV6 379 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 OR51L1Q8NGJ5 315 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 KCNK6Q9Y257 313 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 TRDV1A0A1B0GX56 115 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SOCS7O14512 581 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SLC31A1O15431 190 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 MMP2P08253 660 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 GRPRP30550 384 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 SNRPGP62308 76 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ZNF805Q5CZA5 627 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 TCTE1Q5JU00 501 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ABHD13Q7L211 337 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 WDR53Q7Z5U6 358 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CD300LFQ8TDQ1 290 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 HCAR2Q8TDS4 363 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 DPH7Q9BTV6 452 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ASF1BQ9NVP2 202 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 CNTRLQ7Z7A1 2325 aa12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 MYH14Q7Z406 1995 aaKnown RBP12.38□□□□□ -0.43
PCDHGB3-201ENST00000576222 ASPDHA6ND91 283 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 TGM6O95932 706 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GALTP07902 379 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 NUDT1P36639 197 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GATMP50440 423 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 POU6F2P78424 691 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CRYZQ08257 329 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 SYPL1Q16563 259 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CAMKVQ8NCB2 501 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 INSL5Q9Y5Q6 135 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 TRAV18A0A075B6X5 111 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 C1orf196B1AJZ1 125 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 EEF1E1-BLOC1S5C9J1V9 151 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GATBO75879 557 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PIPP12273 146 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PSMB1P20618 241 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CD34P28906 385 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GRK5P34947 590 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 TEKQ02763 1124 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PGGHGQ32M88 737 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PRSS36Q5K4E3 855 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 NLGN2Q8NFZ4 835 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 HMGB4Q8WW32 186 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 ELP4Q96EB1 424 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GAL3ST4Q96RP7 486 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 PITX2Q99697 317 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 GRHPRQ9UBQ7 328 aa12.37□□□□□ -0.43
PCDHGB3-201ENST00000576222 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms