RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SLC7A7Q9UM01 511 aa22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 LSM2Q9Y333 95 aaKnown RBP22.03■■□□□ 1.12
NPLOC4-217ENST00000574897 CHST10O43529 356 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 CDC123O75794 336 aaPredicted RBP22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 AGR2O95994 175 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 ALOX5P09917 674 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 RFX3P48380 749 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 SERPINB10P48595 397 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 EFNB1P98172 346 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 DUSP8Q13202 625 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 TDGQ13569 410 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF846Q147U1 533 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 EXOSC6Q5RKV6 272 aaKnown RBP22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 RRM2BQ7LG56 351 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 ATCAYQ86WG3 371 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 FAM26EQ8N5C1 309 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 ZNF582Q96NG8 517 aaPredicted RBP22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 MAP3K3Q99759 626 aa22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 RPL36Q9Y3U8 105 aaKnown RBP22.02■■□□□ 1.12
NPLOC4-217ENST00000574897 DSCR3O14972 297 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 PLOD3O60568 738 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 CH25HO95992 272 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 GNSP15586 552 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 BLKP51451 505 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 PSMD7P51665 324 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 LIMK1P53667 647 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 TSPAN31Q12999 210 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 LARS2Q15031 903 aaKnown RBP22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 MCFD2Q8NI22 146 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 TEX47Q8TBZ9 253 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 ABHD8Q96I13 439 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 SLC2A4RGQ9NR83 387 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 ZNF232Q9UNY5 417 aa22.02■■□□□ 1.11
NPLOC4-217ENST00000574897 TGFBR3LH3BV60 316 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 UBXN7O94888 489 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 GSTM3P21266 225 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 CSTF2P33240 577 aaKnown RBP eCLIP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 SMSP52788 366 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ERV3-1Q14264 604 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 MANEAQ5SRI9 462 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 MRPL2Q5T653 305 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 MCATQ8IVS2 390 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ZNF619Q8N2I2 560 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ACOT11Q8WXI4 607 aaPredicted RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ANKHQ9HCJ1 492 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 HMG20AQ9NP66 347 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 PRDM9Q9NQV7 894 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 CARD8Q9Y2G2 431 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 CBX7O95931 251 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 HTR2AP28223 471 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 GABRA3P34903 492 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 RAB38P57729 211 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 MAT1AQ00266 395 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 INAQ16352 499 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 SLC30A6Q6NXT4 461 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ARL14Q8N4G2 192 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 PIGXQ8TBF5 258 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 LMX1AQ8TE12 382 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 MSANTD3Q96H12 275 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 UBE2ZQ9H832 354 aaPredicted RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 TRIM45Q9H8W5 580 aaPredicted RBP22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 HHATLQ9HCP6 504 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 FBXO8Q9NRD0 319 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 RHBDL2Q9NX52 303 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 ERGIC3Q9Y282 383 aa22.01■■□□□ 1.11
NPLOC4-217ENST00000574897 TP53BP1Q12888 1972 aaPredicted RBP22■■□□□ 1.11
NPLOC4-217ENST00000574897 A0A087WV62 115 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 HRKO00198 91 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 PFDN1O60925 122 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 HBQ1P09105 142 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 UGT2B10P36537 528 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 IFITM3Q01628 133 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 PLAURQ03405 335 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 MEDAGQ5VYS4 303 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 SLC27A4Q6P1M0 643 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 CDRT4Q8N9R6 151 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 OR4Q3Q8NH05 313 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 FOXQ1Q9C009 403 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 ASXL3Q9C0F0 2248 aa22■■□□□ 1.11
NPLOC4-217ENST00000574897 WWP2O00308 870 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 CDC42EP2O14613 210 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 STX11O75558 287 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 FUT1P19526 365 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 FZD5Q13467 585 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 UBXN2BQ14CS0 331 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 NCF4Q15080 339 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 DECR1Q16698 335 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 CHRDL2Q6WN34 429 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 WDR88Q6ZMY6 472 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 METTL27Q8N6F8 245 aaPredicted RBP21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 OR52R1Q8NGF1 315 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 OR52I1Q8NGK6 324 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 CTHRC1Q96CG8 243 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 TAPBPLQ9BX59 468 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 METTL15A6NJ78 407 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 CHURC1-FNTBB4DL54 471 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 PPM1FP49593 454 aaPredicted RBP21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 DCDC5Q6ZRR9 648 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 RASSF6Q6ZTQ3 369 aa21.99■■□□□ 1.11
NPLOC4-217ENST00000574897 USP43Q70EL4 1123 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms