RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 IGLV3-16A0A075B6K0 115 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PRAMEF27A3QJZ7 478 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 TRABD2BA6NFA1 517 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 FAM183AA6NL82 134 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 SOCS6O14544 535 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 KDM4BO94953 1096 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 CBX7O95931 251 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 RAB3AP20336 220 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 XPAP23025 273 aaPredicted RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 F8A1P23610 371 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 TRIM23P36406 574 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 RPL35P42766 123 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 VEGFCP49767 419 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 AKR1D1P51857 326 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PUS10Q3MIT2 529 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 HECTD3Q5T447 861 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 OR4D9Q8NGE8 314 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 HMGB4Q8WW32 186 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ASZ1Q8WWH4 475 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 NEURL3Q96EH8 262 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 FAM46AQ96IP4 442 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 DPH7Q9BTV6 452 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 CWH43Q9H720 699 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 AUNIPQ9H7T9 357 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 MYNNQ9NPC7 610 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 DMRT3Q9NQL9 472 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 MGAT4CQ9UBM8 478 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 GPR160Q9UJ42 338 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 OR51B4Q9Y5P0 310 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 A0A087WUU8 490 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ZC3H12DA2A288 527 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 ZNF98A6NK75 572 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ANXA2P2A6NMY6 339 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ZNF197O14709 1029 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 MID1O15344 667 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 GMDSO60547 372 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 NFATC1O95644 943 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 HOXB3P14651 431 aaPredicted RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 GNSP15586 552 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PTNP21246 168 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ARHGDIBP52566 201 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 RETSATQ6NUM9 610 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ARL9Q6T311 187 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 ZNF740Q8NDX6 193 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 BVESQ8NE79 360 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 SEC22CQ9BRL7 303 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 SLC6A15Q9H2J7 730 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
SMG6-215ENST00000574501 ZCCHC4Q9H5U6 513 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 DOCK3Q8IZD9 2030 aa13.51□□□□□ -0.25
SMG6-215ENST00000574501 PLSCR5A0PG75 271 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 SYN3O14994 580 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 PEX14O75381 377 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 SNRPBP14678 240 aaKnown RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 E2F1Q01094 437 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ACSM1Q08AH1 577 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 GPR17Q13304 367 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 AADACL4Q5VUY2 407 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 GLB1LQ6UWU2 654 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 TPRG1Q6ZUI0 275 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 USP50Q70EL3 339 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 RRM2BQ7LG56 351 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 SYT9Q86SS6 491 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 OR52N1Q8NH53 320 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 RFKQ969G6 155 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ECHDC3Q96DC8 303 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ORAI3Q9BRQ5 295 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 WDR26Q9H7D7 661 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ING1Q9UK53 422 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 PRELID3BQ9Y3B1 194 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 VWA8A3KMH1 1905 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ZNF106Q9H2Y7 1883 aaKnown RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 A0A1W2PPK0 400 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 ZNF840PA6NDX5 716 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 DNASE2O00115 360 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 EPPINO95925 133 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 FGF2P09038 288 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 NFYAP23511 347 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 RPL3P39023 403 aaKnown RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 BUD31P41223 144 aaPredicted RBP13.5□□□□□ -0.25
SMG6-215ENST00000574501 SLC3A1Q07837 685 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 CEACAM19Q7Z692 300 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 TBC1D19Q8N5T2 526 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
SMG6-215ENST00000574501 HERVK_113Q902F9 699 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms