RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	DUSP2	Q05923	314 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	MGAT2	Q10469	447 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CAPRIN1	Q14444	709 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	NTRK2	Q16620	822 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	SLC22A16	Q86VW1	577 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CHERP	Q8IWX8	916 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	MSRB3	Q8IXL7	192 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	VWA5B2	Q8N398	1253 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	OR9A2	Q8NGT5	310 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ADIPOR1	Q96A54	375 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	NEURL3	Q96EH8	262 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	GAL3ST4	Q96RP7	486 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ECSIT	Q9BQ95	431 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	THTPA	Q9BU02	230 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	CADM1	Q9BY67	442 aa	Known RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ZDHHC11	Q9H8X9	412 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	SLC6A13	Q9NSD5	602 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ADA2	Q9NZK5	511 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ABCD2	Q9UBJ2	740 aa		13.21	□□□□□ -0.29
ABR-223	ENST00000573895	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.21	□□□□□ -0.29
ABR-223	ENST00000573895	ANKRD33B	A6NCL7	494 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	CCL21	O00585	134 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	GLS	O94925	669 aa	Predicted RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	FREM3	P0C091	2139 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	TMED10	P49755	219 aa	Known RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	NRG3	P56975	720 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	ZNF628	Q5EBL2	1059 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	CMPK2	Q5EBM0	449 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	HLA-DQA1	Q5Y7H0	255 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	SAXO2	Q658L1	398 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	ARHGAP11A	Q6P4F7	1023 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	ZCCHC12	Q6PEW1	402 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	RPTN	Q6XPR3	784 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	C6orf120	Q7Z4R8	191 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	EID3	Q8N140	333 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	OR2L13	Q8N349	312 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	ADCY4	Q8NFM4	1077 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	FAM120B	Q96EK7	910 aa	Known RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	SECISBP2	Q96T21	854 aa	Known RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	SLC39A3	Q9BRY0	314 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	SPATA9	Q9BWV2	254 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	TTTY12	Q9BZ98	90 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	THUMPD1	Q9NXG2	353 aa	Known RBP	13.2	□□□□□ -0.3
ABR-223	ENST00000573895	MAT2B	Q9NZL9	334 aa		13.2	□□□□□ -0.3
ABR-223	ENST00000573895	RNF103-CHMP3	A0A140T963	221 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	UPK1A	O00322	258 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	TP53I11	O14683	189 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	HS6ST1	O60243	411 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	ZG16	O60844	167 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CLDN1	O95832	211 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CCL3	P10147	92 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	ABO	P16442	354 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	NAGA	P17050	411 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	SOAT1	P35610	550 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	PRIM2	P49643	509 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	SLC7A2	P52569	658 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	DCAF7	P61962	342 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	PPIA	P62937	165 aa	Known RBP	13.19	□□□□□ -0.3
ABR-223	ENST00000573895	FOXO1	Q12778	655 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	FADD	Q13158	208 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	GAB1	Q13480	694 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	TP53BP2	Q13625	1128 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	LTB4R	Q15722	352 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	C3AR1	Q16581	482 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	GTDC1	Q4AE62	458 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	RABL3	Q5HYI8	236 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	TBCEL	Q5QJ74	424 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	PGM2L1	Q6PCE3	622 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	TMEM107	Q6UX40	140 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.19	□□□□□ -0.3
ABR-223	ENST00000573895	SERPINA11	Q86U17	422 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	FBXW8	Q8N3Y1	598 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	NUP43	Q8NFH3	380 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	TNIP2	Q8NFZ5	429 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	OR52N2	Q8NGI0	321 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	MIPOL1	Q8TD10	442 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	DOK4	Q8TEW6	326 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	KAT2A	Q92830	837 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CCDC120	Q96HB5	630 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	KAT8	Q9H7Z6	458 aa	Known RBP	13.19	□□□□□ -0.3
ABR-223	ENST00000573895	DDX18	Q9NVP1	670 aa	Known RBP	13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CMTM6	Q9NX76	183 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	PRODH2	Q9UF12	536 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CD300A	Q9UGN4	299 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	NPFFR2	Q9Y5X5	522 aa		13.19	□□□□□ -0.3
ABR-223	ENST00000573895	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	13.19	□□□□□ -0.3
ABR-223	ENST00000573895	PHF3	Q92576	2039 aa	Known RBP	13.18	□□□□□ -0.3
ABR-223	ENST00000573895	TEX15	Q9BXT5	2789 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	PINLYP	A6NC86	204 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	TTC36	A6NLP5	189 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	DUXA	A6NLW8	204 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	NME4	O00746	187 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	PRRG2	O14669	202 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	ACOX3	O15254	700 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	COQ9	O75208	318 aa		13.18	□□□□□ -0.3
ABR-223	ENST00000573895	CBX7	O95931	251 aa		13.18	□□□□□ -0.3

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