RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PLPP4Q5VZY2 271 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 C18orf63Q68DL7 685 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 ADAMTSL4Q6UY14 1074 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 PLEKHM3Q6ZWE6 761 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 RAB42Q8N4Z0 105 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 TTLQ8NG68 377 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 OR4M2Q8NGB6 313 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 MOAP1Q96BY2 351 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 CITED4Q96RK1 184 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 ANKRD19PQ9H560 264 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 ISG20L2Q9H9L3 353 aaKnown RBP14.63□□□□□ -0.07
NUP88-207ENST00000573584 MED17Q9NVC6 651 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 KLHL28Q9NXS3 571 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 SLC27A6Q9Y2P4 619 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 FAM183AA6NL82 134 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 EMC8O43402 210 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 CSNK2A2P19784 350 aaPredicted RBP14.63□□□□□ -0.07
NUP88-207ENST00000573584 MC3RP41968 323 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 RGS8P57771 180 aaPredicted RBP14.63□□□□□ -0.07
NUP88-207ENST00000573584 COL9A2Q14055 689 aaPredicted RBP14.63□□□□□ -0.07
NUP88-207ENST00000573584 DECR1Q16698 335 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 C16orf62Q7Z3J2 963 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 CPOQ8IVL8 374 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 SLC37A3Q8NCC5 494 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 NUP43Q8NFH3 380 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 OR51G2Q8NGK0 314 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 OR2A1Q8NGT9 310 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 MS4A6EQ96DS6 147 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 ART5Q96L15 291 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 C12orf66Q96MD2 445 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 TOX2Q96NM4 488 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 GTPBP2Q9BX10 602 aaKnown RBP14.63□□□□□ -0.07
NUP88-207ENST00000573584 PRDM7Q9NQW5 492 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 HSPB11Q9Y547 144 aa14.63□□□□□ -0.07
NUP88-207ENST00000573584 GTPBP1O00178 669 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 SOCS6O14544 535 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 PLOD3O60568 738 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 FCMRO60667 390 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 AIFM1O95831 613 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 HOXB3P14651 431 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 EVI2BP34910 448 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 MRPL28Q13084 256 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 LRRC32Q14392 662 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ZNF620Q6ZNG0 422 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 GRASPQ7Z6J2 395 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 SIRT6Q8N6T7 355 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 OR2T33Q8NG76 320 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 TMEM255BQ8WV15 326 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ACOT12Q8WYK0 555 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 AKAP1Q92667 903 aaKnown RBP eCLIP14.62□□□□□ -0.07
NUP88-207ENST00000573584 CREB3L1Q96BA8 519 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 FCRL4Q96PJ5 515 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 MCHR1Q99705 422 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 POLMQ9NP87 494 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 TRPV5Q9NQA5 729 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 HINT3Q9NQE9 182 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 PRKAG2Q9UGJ0 569 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 PIP5K1CO60331 668 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ADH1CP00326 375 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 PTNP21246 168 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 MPIP34949 423 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 P2RY2P41231 377 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 AGFG1P52594 562 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 FZD5Q13467 585 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ABHD17CQ6PCB6 329 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 NR2C2APQ86WQ0 139 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 OR9A2Q8NGT5 310 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 NACC2Q96BF6 587 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 KCNN2Q9H2S1 579 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 OSGEPL1Q9H4B0 414 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 SLC28A3Q9HAS3 691 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ZFR2Q9UPR6 939 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 MYO10Q9HD67 2058 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 HEATR5BQ9P2D3 2071 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 RNF13O43567 381 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 HMGN1P05114 100 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 CSF2RAP15509 400 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ATP5A1P25705 553 aaKnown RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 ZIC1Q15915 447 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 LAMTOR1Q6IAA8 161 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ASB18Q6ZVZ8 466 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 GDF7Q7Z4P5 450 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 DTX3Q8N9I9 347 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 ELP4Q96EB1 424 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 SLC41A3Q96GZ6 507 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 SAMD8Q96LT4 415 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 INSM2Q96T92 566 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 TRAF4Q9BUZ4 470 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 PAK6Q9NQU5 681 aaPredicted RBP14.62□□□□□ -0.07
NUP88-207ENST00000573584 CALML5Q9NZT1 146 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 PHF11Q9UIL8 331 aa14.62□□□□□ -0.07
NUP88-207ENST00000573584 RGS9O75916 674 aaPredicted RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 THY1P04216 161 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 ACRP10323 421 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 CEBPBP17676 345 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 NDUFV2P19404 249 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 GALP22466 123 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 AHRP35869 848 aa14.61□□□□□ -0.07
NUP88-207ENST00000573584 RNF144AP50876 292 aaPredicted RBP14.61□□□□□ -0.07
NUP88-207ENST00000573584 ARPC4P59998 168 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms