RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 B3GNT2Q9NY97 397 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 IL20Q9NYY1 176 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-207ENST00000572253 IRAK3Q9Y616 596 aa10.08□□□□□ -0.8
CCDC40-207ENST00000572253 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 A0A0X1KG70 313 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 EDDM13A0A1B0GTR0 161 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DAPL1A0PJW8 107 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SMLR1H3BR10 107 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 GCGRP47871 477 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PITPNBP48739 271 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 CLCNKAP51800 687 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF155Q12901 538 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DHCR24Q15392 516 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ESCO2Q56NI9 601 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF782Q6ZMW2 699 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SAMD12Q8N8I0 201 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 AMER3Q8N944 861 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SRFBP1Q8NEF9 429 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF431Q8TF32 576 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 C16orf58Q96GQ5 468 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SENP5Q96HI0 755 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 CSNK1G3Q9Y6M4 447 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF780BQ9Y6R6 833 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 GOLGA4Q13439 2230 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 OR5F1O95221 314 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ADH5P11766 374 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PRKAR1BP31321 381 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PTGER1P34995 402 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 NUDT1P36639 197 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 METAP1P53582 386 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 FAM205BPQ63HN1 556 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ZNF620Q6ZNG0 422 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 GHDCQ8N2G8 530 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SLC41A3Q96GZ6 507 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 UBL7Q96S82 380 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DCLRE1CQ96SD1 692 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 TRMT61BQ9BVS5 477 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 CYSLTR2Q9NS75 346 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 CACNG2Q9Y698 323 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 LRIT2A6NDA9 550 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DUXAA6NLW8 204 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 BTN3A3O00478 584 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SPINT1O43278 529 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ADH1CP00326 375 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 C8orf89P0DMQ9 161 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 BMP7P18075 431 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SLC6A1P30531 599 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 EVI2BP34910 448 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 FUT5Q11128 374 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 LRRC32Q14392 662 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 NTRK2Q16620 822 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SIGIRRQ6IA17 410 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PYHIN1Q6K0P9 492 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 MBOAT2Q6ZWT7 520 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 TRILQ7L0X0 811 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DNAJC5GQ8N7S2 189 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 OR8K5Q8NH50 307 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ALG8Q9BVK2 526 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 OSGEPL1Q9H4B0 414 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 IMP3Q9NV31 184 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PTTG3PQ9NZH4 202 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DENND4CQ5VZ89 1909 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 CENPFP49454 3210 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SOCS6O14544 535 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 EEF1E1O43324 174 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 LCMT2O60294 686 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ICMTO60725 284 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PRKRAO75569 313 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 RHOP08100 348 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 IFI30P13284 250 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 HK1P19367 917 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 RPS7P62081 194 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 DEFB103AP81534 67 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 PRDX1Q06830 199 aaKnown RBP10.07□□□□□ -0.8
CCDC40-207ENST00000572253 NOGQ13253 232 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM52BQ4KMG9 183 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 BCL2L15Q5TBC7 163 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 METRNLQ641Q3 311 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ARL9Q6T311 187 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 ADAMTSL4Q6UY14 1074 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 OR4M1Q8NGD0 313 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 KLK6Q92876 244 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SAMD8Q96LT4 415 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 JAM3Q9BX67 310 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 SLC38A1Q9H2H9 487 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 TMEM39AQ9NV64 488 aa10.07□□□□□ -0.8
CCDC40-207ENST00000572253 COL4A6Q14031 1691 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 FABP7O15540 132 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 GNRH1P01148 92 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 MT-ND5P03915 603 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 PCCBP05166 539 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ANXA3P12429 323 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 PEPDP12955 493 aa10.06□□□□□ -0.8
CCDC40-207ENST00000572253 HIST1H1TP22492 207 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 ELAVL3Q14576 367 aaKnown RBP10.06□□□□□ -0.8
CCDC40-207ENST00000572253 INSL4Q14641 139 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms