RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 MAGED1Q9Y5V3 778 aaPredicted RBP17.77■□□□□ 0.44
CCDC40-206ENST00000572083 PCNX3Q9H6A9 2034 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 FADS1O60427 444 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 ADAM11O75078 769 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 SS18L1O75177 396 aaPredicted RBP17.76■□□□□ 0.43
CCDC40-206ENST00000572083 IL3P08700 152 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 DANCRP0C864 163 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 PSPHP78330 225 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 PSG6Q00889 435 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 NAB1Q13506 487 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 PLD6Q8N2A8 252 aaKnown RBP17.76■□□□□ 0.43
CCDC40-206ENST00000572083 DUSP19Q8WTR2 217 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 NEUROG1Q92886 237 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 FBXW5Q969U6 566 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 ERP44Q9BS26 406 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 SDHAF3Q9NRP4 125 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 ABCG2Q9UNQ0 655 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 RNF115Q9Y4L5 304 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 AP4B1Q9Y6B7 739 aa17.76■□□□□ 0.43
CCDC40-206ENST00000572083 PPP6CO00743 305 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 ZSCAN12O43309 604 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 NDUFS7O75251 213 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 IGHV4-39P01824 125 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 TRA2BP62995 288 aaKnown RBP17.75■□□□□ 0.43
CCDC40-206ENST00000572083 FAPQ12884 760 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 UAP1Q16222 522 aaPredicted RBP17.75■□□□□ 0.43
CCDC40-206ENST00000572083 LETMD1Q6P1Q0 360 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 BEND4Q6ZU67 534 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 MARCH3Q86UD3 253 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 TACO1Q9BSH4 297 aaKnown RBP17.75■□□□□ 0.43
CCDC40-206ENST00000572083 VPS11Q9H270 941 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 C12orf49Q9H741 205 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 BRF2Q9HAW0 419 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 FANCFQ9NPI8 374 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 TAS2R9Q9NYW1 312 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 LIPT1Q9Y234 373 aa17.75■□□□□ 0.43
CCDC40-206ENST00000572083 A8MV72 311 aaPredicted RBP17.74■□□□□ 0.43
CCDC40-206ENST00000572083 F12P00748 615 aaPredicted RBP17.74■□□□□ 0.43
CCDC40-206ENST00000572083 TSPAN8P19075 237 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 TYK2P29597 1187 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 MAGEA4P43358 317 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 RFX3P48380 749 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC40-206ENST00000572083 ADAM5Q6NVV9 412 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 OR10D3Q8NH80 312 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 SMAP2Q8WU79 429 aaPredicted RBP17.74■□□□□ 0.43
CCDC40-206ENST00000572083 S100PBPQ96BU1 408 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 VDAC3Q9Y277 283 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 SAR1BQ9Y6B6 198 aa17.74■□□□□ 0.43
CCDC40-206ENST00000572083 STX16-NPEPL1H3BU86 382 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 STX16O14662 325 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 PLOD3O60568 738 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 PSMB1P20618 241 aaKnown RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 PAFAH1B1P43034 410 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 SERPINB8P50452 374 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 TCHHL1Q5QJ38 904 aaPredicted RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 ATG4DQ86TL0 474 aaPredicted RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 STK32CQ86UX6 486 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 FAM9CQ8IZT9 166 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 ZNF619Q8N2I2 560 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 GIMAP4Q9NUV9 329 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 FAM120CQ9NX05 1096 aaKnown RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 XPR1Q9UBH6 696 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 VPS29Q9UBQ0 182 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 RNF14Q9UBS8 474 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 MCM8Q9UJA3 840 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 GDF2Q9UK05 429 aaPredicted RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 MCTS1Q9ULC4 181 aaKnown RBP17.73■□□□□ 0.43
CCDC40-206ENST00000572083 SNX6Q9UNH7 406 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 GPR52Q9Y2T5 361 aa17.73■□□□□ 0.43
CCDC40-206ENST00000572083 A0A1W2PP18 115 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 RAD51CO43502 376 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 CXCL13O43927 109 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 OPN1LWP04000 364 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 IL11P20809 199 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 PLTPP55058 493 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 CDH13P55290 713 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 TSC22D1Q15714 1073 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 DECR1Q16698 335 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 TMEM44Q2T9K0 475 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 GLYR1Q49A26 553 aaPredicted RBP17.72■□□□□ 0.43
CCDC40-206ENST00000572083 DNM1P46Q6ZS02 220 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 GALNT10Q86SR1 603 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 SAMD14Q8IZD0 417 aaPredicted RBP17.72■□□□□ 0.43
CCDC40-206ENST00000572083 KBTBD8Q8NFY9 601 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 OR10A4Q9H209 315 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 SLC35C2Q9NQQ7 365 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 NMRK1Q9NWW6 199 aa17.72■□□□□ 0.43
CCDC40-206ENST00000572083 GNG14A0A1W2PPG7 69 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 FAM187AA6NFU0 413 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 PCDH7O60245 1069 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 GPRIN2O60269 458 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 COQ9O75208 318 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 SMIM24O75264 130 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 SYNGR4O95473 234 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 OTCP00480 354 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 CD3EP07766 207 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 RPS17P08708 135 aaKnown RBP17.71■□□□□ 0.43
CCDC40-206ENST00000572083 FAM157CP0CG43 387 aa17.71■□□□□ 0.43
CCDC40-206ENST00000572083 CHN1P15882 459 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms