RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 INTS14Q96SY0 518 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 LHPPQ9H008 270 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 PCBD2Q9H0N5 130 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 HINT3Q9NQE9 182 aaKnown RBP6.62□□□□□ -1.35
CNOT1-222ENST00000570139 DNAJC11Q9NVH1 559 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 TMEM45AQ9NWC5 275 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 CISD1Q9NZ45 108 aaKnown RBP6.62□□□□□ -1.35
CNOT1-222ENST00000570139 HEY2Q9UBP5 337 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 OR14J1Q9UGF5 321 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 ZNHIT2Q9UHR6 403 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 ZDHHC2Q9UIJ5 367 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 IKZF3Q9UKT9 509 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 OR1A2Q9Y585 309 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 LRP4O75096 1905 aa6.62□□□□□ -1.35
CNOT1-222ENST00000570139 OOEPA6NGQ2 149 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 OR5K4A6NMS3 321 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 SLC31A1O15431 190 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 PI15O43692 258 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 RGS11O94810 467 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CLDN9O95484 217 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 KRT6AP02538 564 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 GBAP04062 536 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 KRT6BP04259 564 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ERGP11308 486 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 EZRP15311 586 aaKnown RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 GNAZP19086 355 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 AOC1P19801 751 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 MYF6P23409 242 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 PRDX6P30041 224 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 HMOX2P30519 316 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 SERPINB1P30740 379 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 DCTDP32321 178 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CXCL12P48061 93 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 KRT6CP48668 564 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ATP4BP51164 291 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ILF3Q12906 894 aaKnown RBP eCLIP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ABRQ12979 859 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 GRIK2Q13002 908 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 MAPRE2Q15555 327 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 C2orf68Q2NKX9 166 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 FAM98BQ52LJ0 330 aaKnown RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CAPRIN2Q6IMN6 1127 aaKnown RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CAPN13Q6MZZ7 669 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 AGTRAPQ6RW13 159 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 VRK3Q8IV63 474 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 FAM9CQ8IZT9 166 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 HORMAD2Q8N7B1 307 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 PNLDC1Q8NA58 520 aaKnown RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 OR9A1PQ8NGU1 263 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 PSMA8Q8TAA3 256 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 SETD7Q8WTS6 366 aaKnown RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 TWIST2Q8WVJ9 160 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ADAMTS14Q8WXS8 1223 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ROBO4Q8WZ75 1007 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 TFGQ92734 400 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 KLK6Q92876 244 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 UBE2E3Q969T4 207 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 BIRC7Q96CA5 298 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ERLEC1Q96DZ1 483 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CMTM5Q96DZ9 223 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 C8orf49Q96NF6 230 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 TIMP4Q99727 224 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 HAUS8Q9BT25 410 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 EFCAB11Q9BUY7 163 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 GPR174Q9BXC1 333 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 EHD1Q9H4M9 534 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 C6orf106Q9H6K1 298 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 CYSLTR2Q9NS75 346 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 STOX2Q9P2F5 926 aaPredicted RBP6.61□□□□□ -1.35
CNOT1-222ENST00000570139 LNPEPQ9UIQ6 1025 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 UTS2RQ9UKP6 389 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 SNX6Q9UNH7 406 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 ASF1AQ9Y294 204 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 KCNK7Q9Y2U2 307 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 COLEC10Q9Y6Z7 277 aa6.61□□□□□ -1.35
CNOT1-222ENST00000570139 SPTY2D1-AS1A0A0U1RR47 76 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 MEI4A8MW99 385 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SLC28A1O00337 649 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SLC33A1O00400 549 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SDHDO14521 159 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 UBFD1O14562 309 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 OR7A17O14581 309 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PGRMC2O15173 223 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 TAPBPO15533 448 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 RGS14O43566 566 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 B3GALNT1O75752 331 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 TNFP01375 233 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 WT1P19544 449 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 CALB2P22676 271 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 DNASE1P24855 282 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 HRH2P25021 359 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 CXCR2P25025 360 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 IMPA1P29218 277 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 GNPDA1P46926 289 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 MRPL19P49406 292 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SRP54P61011 504 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 STX1BP61266 288 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PHEXP78562 749 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms