RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ALDH3A1P30838 453 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 GABRA3P34903 492 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 GPC1P35052 558 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 MAP3K8P41279 467 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 ASMTP46597 345 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 ART1P52961 327 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 VPS26BQ4G0F5 336 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 ZNF385BQ569K4 471 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 ANKRD26P1Q6NSI1 321 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 GRAMD2AQ8IUY3 354 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 CEP70Q8NHQ1 597 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 GOT1L1Q8NHS2 421 aaPredicted RBP17.98■□□□□ 0.47
CLN6-206ENST00000565471 CIDECQ96AQ7 238 aaPredicted RBP17.98■□□□□ 0.47
CLN6-206ENST00000565471 INTS12Q96CB8 462 aaKnown RBP17.98■□□□□ 0.47
CLN6-206ENST00000565471 MTERF3Q96E29 417 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 FAM111AQ96PZ2 611 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 RTN4RQ9BZR6 473 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 PIGMQ9H3S5 423 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 EML4Q9HC35 981 aaKnown RBP17.98■□□□□ 0.47
CLN6-206ENST00000565471 MED11Q9P086 117 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 CELSR1Q9NYQ6 3014 aa17.98■□□□□ 0.47
CLN6-206ENST00000565471 HIVEP1P15822 2718 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 IGLV3-32A0A0A0MS00 114 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 AKAP10O43572 662 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 NKX2-2O95096 273 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 UTS2O95399 124 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 CHRNGP07510 517 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 TCEA1P23193 301 aaKnown RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 IST1P53990 364 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 PRR5P85299 388 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 STX5Q13190 355 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 UGT3A2Q3SY77 523 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 GLYR1Q49A26 553 aaPredicted RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 ARL13AQ5H913 290 aaPredicted RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 RAET1LQ5VY80 246 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 CDRT4Q8N9R6 151 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 DUSP19Q8WTR2 217 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 TWIST2Q8WVJ9 160 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 RMND5BQ96G75 393 aaPredicted RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 MS4A4EQ96PG1 132 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 RBM24Q9BX46 236 aaKnown RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 TBL1XR1Q9BZK7 514 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 ROPN1BQ9BZX4 212 aaPredicted RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 ROPN1Q9HAT0 212 aaPredicted RBP17.97■□□□□ 0.47
CLN6-206ENST00000565471 HHATLQ9HCP6 504 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 EQTNQ9NQ60 294 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 SH3BP4Q9P0V3 963 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 ST6GALNAC2Q9UJ37 374 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 EDARQ9UNE0 448 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 TRAF6Q9Y4K3 522 aa17.97■□□□□ 0.47
CLN6-206ENST00000565471 MED12LQ86YW9 2145 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GXYLT2A0PJZ3 443 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 CRHP06850 196 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 DDX5P17844 614 aaKnown RBP17.96■□□□□ 0.47
CLN6-206ENST00000565471 SERPINB5P36952 375 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 RFX3P48380 749 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 MANFP55145 182 aaKnown RBP17.96■□□□□ 0.47
CLN6-206ENST00000565471 EEFSECP57772 596 aaKnown RBP17.96■□□□□ 0.47
CLN6-206ENST00000565471 VSNL1P62760 191 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 C17orf67Q0P5P2 114 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 PLXDC2Q6UX71 529 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 LRIG3Q6UXM1 1119 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 CHMP1BQ7LBR1 199 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 R3HCC1LQ7Z5L2 792 aaKnown RBP17.96■□□□□ 0.47
CLN6-206ENST00000565471 MARCH3Q86UD3 253 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 CDC20BQ86Y33 519 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 DDIASQ8IXT1 998 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GCNT2Q8N0V5 402 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 MEIOBQ8N635 442 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GPR151Q8TDV0 419 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 C1GALT1C1Q96EU7 318 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GIMAP5Q96F15 307 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 FOXC2Q99958 501 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 GALNT8Q9NY28 637 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 SLC17A7Q9P2U7 560 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 BAIAP2L1Q9UHR4 511 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 PACSIN3Q9UKS6 424 aa17.96■□□□□ 0.47
CLN6-206ENST00000565471 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 TMEM233B4DJY2 109 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 PIP5K1BO14986 540 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 TNFSF13O75888 250 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 ANGPTL1O95841 491 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 TGM6O95932 706 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 IGKV1D-16P01601 117 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 NGFRP08138 427 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 BCKDHAP12694 445 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 MAPK1P28482 360 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 CPA2P48052 419 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 DIO3P55073 304 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 IFFO1Q0D2I5 559 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 GRAMD1BQ3KR37 738 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 GALNTL6Q49A17 601 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 OR2A2Q6IF42 318 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 ZCCHC12Q6PEW1 402 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 NUP43Q8NFH3 380 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 CLHC1Q8NHS4 586 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 LINC01560Q8TB33 94 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 TCP10LQ8TDR4 215 aa17.95■□□□□ 0.46
CLN6-206ENST00000565471 PIK3R3Q92569 461 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms