RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MAPK14Q16539 360 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 CT45A2Q5DJT8 189 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 NPSR1Q6W5P4 371 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 LINC00471Q8N535 108 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 AQP11Q8NBQ7 271 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 SETD9Q8NE22 299 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 OR14A16Q8NHC5 309 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 STT3BQ8TCJ2 826 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 ATOH1Q92858 354 aaPredicted RBP18.14■□□□□ 0.49
CLN6-205ENST00000564846 FUZQ9BT04 418 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 ITPAQ9BY32 194 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 MRPS26Q9BYN8 205 aaKnown RBP18.14■□□□□ 0.49
CLN6-205ENST00000564846 C14orf105Q9NVL8 296 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 ENOPH1Q9UHY7 261 aa18.14■□□□□ 0.49
CLN6-205ENST00000564846 NUP210LQ5VU65 1888 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 CENPVL1A0A0U1RR11 272 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 PEX12O00623 359 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 AP3D1O14617 1153 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 SMNDC1O75940 238 aaKnown RBP eCLIP18.13■□□□□ 0.49
CLN6-205ENST00000564846 IGKV3-11P04433 115 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 CCNYL3P0C7X3 344 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 CYP4B1P13584 511 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 EFNA3P52797 238 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 TAS2R41P59536 307 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 B3GNT8Q7Z7M8 397 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 PRSS58Q8IYP2 241 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 PARP8Q8N3A8 854 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 TSPAN14Q8NG11 270 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 OR4N2Q8NGD1 307 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 SLC7A13Q8TCU3 470 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 SLC2A12Q8TD20 617 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 APOL4Q9BPW4 351 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 NIPSNAP1Q9BPW8 284 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 KCNE5Q9UJ90 142 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 NDRG4Q9ULP0 352 aaKnown RBP18.13■□□□□ 0.49
CLN6-205ENST00000564846 CBLCQ9ULV8 474 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 MGAT4BQ9UQ53 548 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 HSPE1-MOB4S4R3N1 261 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 KMT2EQ8IZD2 1858 aa18.13■□□□□ 0.49
CLN6-205ENST00000564846 DPPA5A6NC42 116 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 CLDN24A6NM45 220 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 A8MUA0 341 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 DDAH2O95865 285 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ADAP00813 363 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ZGLP1P0C6A0 271 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 CLK3P49761 638 aaKnown RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 ISL1P61371 349 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ZNF385CQ66K41 422 aaPredicted RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 LAPTM4BQ86VI4 370 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 BMPERQ8N8U9 685 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 PITX2Q99697 317 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 OR8D2Q9GZM6 311 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ANKRD19PQ9H560 264 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 APMAPQ9HDC9 416 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 MAN2C1Q9NTJ4 1040 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 OR10H1Q9Y4A9 318 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 GMPPBQ9Y5P6 360 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 SH3PXD2BA1X283 911 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 CDHR4A6H8M9 788 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 E9PQ18 207 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 POLR1CO15160 346 aaPredicted RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 FRS3O43559 492 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 OR10H3O60404 316 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 TPST2O60704 377 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 CLPTM1O96005 669 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 GASTP01350 101 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 RFX3P48380 749 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ST3GAL3Q11203 375 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 APOFQ13790 326 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 SEC23BQ15437 767 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 MRPL2Q5T653 305 aaKnown RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 OVCH1Q7RTY7 1134 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 ZAR1Q86SH2 424 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 TSPYL5Q86VY4 417 aaPredicted RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 ZNF721Q8TF20 911 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 POLR2J2Q9GZM3 115 aaKnown RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 POLR2J3Q9H1A7 115 aaKnown RBP18.12■□□□□ 0.49
CLN6-205ENST00000564846 PCDHGA10Q9Y5H3 936 aa18.12■□□□□ 0.49
CLN6-205ENST00000564846 TTC28Q96AY4 2481 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 DMDP11532 3685 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 COL5A1P20908 1838 aaPredicted RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 FAM86C2PA6NEL3 165 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 TRIM64A6NGJ6 449 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 IGKV1D-16P01601 117 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 ZNF806P0C7X5 589 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 PPICP45877 212 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 PSMD4P55036 377 aaKnown RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 RPP38P78345 283 aaKnown RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 FOXD4Q12950 439 aaPredicted RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 RAPSNQ13702 412 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 TRAM2Q15035 370 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLN6-205ENST00000564846 ZSWIM7Q19AV6 140 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 PODNL1Q6PEZ8 512 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 RANBP3LQ86VV4 465 aaPredicted RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 APLFQ8IW19 511 aaPredicted RBP18.11■□□□□ 0.49
CLN6-205ENST00000564846 DIO2Q92813 273 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 HRASLS5Q96KN8 279 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 MCHR1Q99705 422 aa18.11■□□□□ 0.49
CLN6-205ENST00000564846 NPIPA5A0A0B4J1W7 369 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms