RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FREM3P0C091 2139 aa12.28□□□□□ -0.44
CDH1-204ENST00000562118 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
CDH1-204ENST00000562118 ZNF407Q9C0G0 2248 aa12.27□□□□□ -0.44
CDH1-204ENST00000562118 A0A1B0GVC2 190 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 A0A1W2PQD3 144 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 ALG1L2C9J202 215 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 NR5A2O00482 541 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 FBP2O00757 339 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 REM1O75628 298 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 ZNF24P17028 368 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 ELAVL4P26378 380 aaKnown RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 KHKP50053 298 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 RPS26P62854 115 aaKnown RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 KLF10Q13118 480 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 CMPK2Q5EBM0 449 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 DCST2Q5T1A1 773 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 PRAMEF20Q5VT98 475 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 TIGD3Q6B0B8 471 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 APOOLQ6UXV4 268 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 COX18Q8N8Q8 333 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 FADS6Q8N9I5 356 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 WDSUB1Q8N9V3 476 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 OR52N2Q8NGI0 321 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 OR5M3Q8NGP4 307 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 FBXO30Q8TB52 745 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 ADAMTS15Q8TE58 950 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 ZNF597Q96LX8 424 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 SDF2Q99470 211 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 YIPF4Q9BSR8 244 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 DOHHQ9BU89 302 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 G6PC3Q9BUM1 346 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 CCDC106Q9BWC9 280 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 RTN4RQ9BZR6 473 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 NSRP1Q9H0G5 558 aaKnown RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 OR51I1Q9H343 314 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 TPT1P8Q9HAU6 139 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 POLE3Q9NRF9 147 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 FBXO34Q9NWN3 711 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 VAPAQ9P0L0 249 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 SLAMF8Q9P0V8 285 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 LEF1Q9UJU2 399 aaPredicted RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 BOKQ9UMX3 212 aaPredicted RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 SVILO95425 2214 aa12.27□□□□□ -0.45
CDH1-204ENST00000562118 RP1L1Q8IWN7 2480 aaPredicted RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 FASNP49327 2511 aaKnown RBP12.27□□□□□ -0.45
CDH1-204ENST00000562118 CLEC18AA5D8T8 446 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 KIAA0513O60268 411 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 UTS2O95399 124 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 KRT75O95678 551 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 OXSR1O95747 527 aaPredicted RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 HPNP05981 417 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 GSNP06396 782 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 SNRPB2P08579 225 aaKnown RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 RFPL3SP0C7P2 107 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 KRT20P35900 424 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 FADDQ13158 208 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 UBAP2LQ14157 1087 aaKnown RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 GRAMD1BQ3KR37 738 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 KRTCAP3Q53RY4 240 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 COX20Q5RI15 118 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 CLEC18BQ6UXF7 455 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 Q6ZPB1 254 aaPredicted RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 ZNF621Q6ZSS3 439 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 SZRD1Q7Z422 152 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 SLC22A16Q86VW1 577 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 RNF130Q86XS8 419 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 FAM109AQ8N4B1 249 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 TMEM251Q8N6I4 163 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 ANKS4BQ8N8V4 417 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 CLEC18CQ8NCF0 446 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 OR4C3Q8NH37 302 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 PMM1Q92871 262 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 OTUB1Q96FW1 271 aaPredicted RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 ELAC2Q9BQ52 826 aaKnown RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 CPPED1Q9BRF8 314 aaPredicted RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 METTL7AQ9H8H3 244 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 GALNT9Q9HCQ5 603 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 ACKR4Q9NPB9 350 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 UBQLN4Q9NRR5 601 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 ZNF835Q9Y2P0 537 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 C15orf41Q9Y2V0 281 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 MRPS18CQ9Y3D5 142 aaKnown RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 USP9XQ93008 2570 aaPredicted RBP12.26□□□□□ -0.45
CDH1-204ENST00000562118 DSPPQ9NZW4 1301 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 DNAJC13O75165 2243 aa12.26□□□□□ -0.45
CDH1-204ENST00000562118 GTF3C1Q12789 2109 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 BBIP1A8MTZ0 92 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 G3V3Y1 287 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 FXYD1O00168 92 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 CCDC22O60826 627 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 TNFRSF21O75509 655 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 UNC5CO95185 931 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 NPPAP01160 153 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 GPX2P18283 190 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 RPS4Y1P22090 263 aaKnown RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 ADH7P40394 386 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 KCNJ2P63252 427 aa12.25□□□□□ -0.45
CDH1-204ENST00000562118 ALDH6A1Q02252 535 aaKnown RBP12.25□□□□□ -0.45
CDH1-204ENST00000562118 ZNF141Q15928 474 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms