RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 DGKQP52824 942 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PRKAG1P54619 331 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 MANFP55145 182 aaKnown RBP15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 CLDN18P56856 261 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 B3GALT5-AS1P59052 145 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PTGR1Q14914 329 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 CES4AQ5XG92 561 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 ARSKQ6UWY0 536 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZZZ3Q8IYH5 903 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 GPR151Q8TDV0 419 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZBTB9Q96C00 473 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 DTNBP1Q96EV8 351 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 GIMAP5Q96F15 307 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 OTUB1Q96FW1 271 aaPredicted RBP15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PPP3R2Q96LZ3 170 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 TMEM109Q9BVC6 243 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 CALHM2Q9HA72 323 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 MED11Q9P086 117 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 ZDHHC2Q9UIJ5 367 aa15.59■□□□□ 0.09
CDC42BPB-208ENST00000561271 PRRC2AP48634 2157 aaKnown RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 FREM1Q5H8C1 2179 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 TMEM114B3SHH9 223 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 EEF1E1-BLOC1S5C9J1V9 151 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 EEF1E1O43324 174 aaKnown RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF500O60304 480 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZIC3O60481 467 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 LYPLA1O75608 230 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZWINTO95229 277 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 KCNH1O95259 989 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 UTS2O95399 124 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ACP2P11117 423 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF708P17019 499 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 CAPN3P20807 821 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 MAPK1P28482 360 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 SERPINB5P36952 375 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 GRAMD1BQ3KR37 738 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ATP6AP1LQ52LC2 224 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 RAET1LQ5VY80 246 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 AAGABQ6PD74 315 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 MARCH3Q86UD3 253 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 EXOC3L1Q86VI1 746 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 NUP43Q8NFH3 380 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 OR7A2PQ8NGA2 310 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 OR6Y1Q8NGX8 325 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 SLC9A6Q92581 669 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 HOXB13Q92826 284 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 RNASE6Q93091 150 aaKnown RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 MTERF3Q96E29 417 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 C3orf14Q9HBI5 128 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ACSS1Q9NUB1 689 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 CLCF1Q9UBD9 225 aa15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 ZNF629Q9UEG4 869 aaPredicted RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 MRTO4Q9UKD2 239 aaKnown RBP15.58■□□□□ 0.08
CDC42BPB-208ENST00000561271 WDR91A4D1P6 747 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 RGS16O15492 202 aaPredicted RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 GMFGO60234 142 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 NKX2-2O95096 273 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 TMIGD3P0DMS9 266 aaPredicted RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 HK1P19367 917 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 CTSSP25774 331 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 MAP3K8P41279 467 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 SERPINB4P48594 390 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 PSMD4P55036 377 aaKnown RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 DSCR4P56555 118 aaPredicted RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 FOXF2Q12947 444 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 FBXL19-AS1Q494R0 122 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 MFSD12Q6NUT3 480 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 R3HCC1LQ7Z5L2 792 aaKnown RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 ADGRE4PQ86SQ3 457 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 UBQLNLQ8IYU4 475 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 GCNT2Q8N0V5 402 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 CDRT4Q8N9R6 151 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 FNDC5Q8NAU1 212 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 OR5M1Q8NGP8 315 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 CEP70Q8NHQ1 597 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 NUDT8Q8WV74 236 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 JADE3Q92613 823 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 NRGNQ92686 78 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 YIPF4Q9BSR8 244 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 TBL1XR1Q9BZK7 514 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 SLC24A3Q9HC58 644 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 SIRT3Q9NTG7 399 aaPredicted RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 CRIM1Q9NZV1 1036 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 ATP6V1HQ9UI12 483 aa15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 MRPS18CQ9Y3D5 142 aaKnown RBP15.57■□□□□ 0.08
CDC42BPB-208ENST00000561271 TTC36A6NLP5 189 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 SYT5O00445 386 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 EMC8O43402 210 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 ITM2AO43736 263 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 HSPA4LO95757 839 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 LAMP1P11279 417 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 CHMP24386 653 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 KIR2DL3P43628 341 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 DUSP5Q16690 384 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 VPS26BQ4G0F5 336 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 C6orf136Q5SQH8 315 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 FIGNL1Q6PIW4 674 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 LRIG3Q6UXM1 1119 aa15.56■□□□□ 0.08
CDC42BPB-208ENST00000561271 APOOLQ6UXV4 268 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms