RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 FBP2O00757 339 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 SLC28A2O43868 658 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 HS6ST1O60243 411 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 UNC5CO95185 931 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 UTS2O95399 124 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 CBX6O95503 412 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 FAM107AO95990 144 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 C1QCP02747 245 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 EDN3P14138 238 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 GPX2P18283 190 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 TBXA2RP21731 343 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 ELAVL4P26378 380 aaKnown RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 MST1P26927 711 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 CHI3L1P36222 383 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 DNASE1L1P49184 302 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 KHKP50053 298 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 GPR85P60893 370 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 KCNJ2P63252 427 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 FOXK1P85037 733 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PMP22Q01453 160 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 ALDH6A1Q02252 535 aaKnown RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 FADDQ13158 208 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 MAPRE2Q15555 327 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PRR30Q53SZ7 412 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 COLEC12Q5KU26 742 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 RNFT1Q5M7Z0 435 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 C6orf10Q5SRN2 563 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 DCST2Q5T1A1 773 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PRAMEF20Q5VT98 475 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 TIGD3Q6B0B8 471 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PRICKLE2Q7Z3G6 844 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PACS2Q86VP3 889 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 RETREG3Q86VR2 466 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 RNF130Q86XS8 419 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 MSRB3Q8IXL7 192 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 ANKS4BQ8N8V4 417 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 GALNT11Q8NCW6 608 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OR52N2Q8NGI0 321 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OR5D16Q8NGK9 328 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OR5M3Q8NGP4 307 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OR4C3Q8NH37 302 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 RP9Q8TA86 221 aaKnown RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 JADE3Q92613 823 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PMM1Q92871 262 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 EFHD2Q96C19 240 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 RMND5BQ96G75 393 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 CCT8L2Q96SF2 557 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 DOHHQ9BU89 302 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 CCDC106Q9BWC9 280 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OSBPL11Q9BXB4 747 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 TTTY12Q9BZ98 90 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 HOXD1Q9GZZ0 328 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 UBQLN3Q9H347 655 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 RAD21L1Q9H4I0 556 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 UBQLN4Q9NRR5 601 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 OLAHQ9NV23 265 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 EXD2Q9NVH0 621 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 FBXO34Q9NWN3 711 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 THUMPD1Q9NXG2 353 aaKnown RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 TUBA8Q9NY65 449 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 VAPAQ9P0L0 249 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 SLAMF8Q9P0V8 285 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 BOKQ9UMX3 212 aaPredicted RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 MRPS18CQ9Y3D5 142 aaKnown RBP8.81□□□□□ -1
RABGGTA-221ENST00000561055 KIAA1549Q9HCM3 1950 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 MPDZO75970 2070 aa8.81□□□□□ -1
RABGGTA-221ENST00000561055 MED12Q93074 2177 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 IGLV3-32A0A0A0MS00 114 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 PRAMEF27A3QJZ7 478 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 LRRC3CA6NJW4 275 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 ACOT7O00154 380 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 SNPHO15079 494 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 ANGPT2O15123 496 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 STX11O75558 287 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 IGHG3P01860 377 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 OR12D1P0DN82 309 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 ZNF24P17028 368 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 EVI2BP34910 448 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 CLK3P49761 638 aaKnown RBP8.8□□□□□ -1
RABGGTA-221ENST00000561055 ATP12AP54707 1039 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 RPS26P62854 115 aaKnown RBP8.8□□□□□ -1
RABGGTA-221ENST00000561055 SF3A3Q12874 501 aaKnown RBP eCLIP8.8□□□□□ -16e-11■■□□□ 13
RABGGTA-221ENST00000561055 UBAP2LQ14157 1087 aaKnown RBP8.8□□□□□ -1
RABGGTA-221ENST00000561055 RGNQ15493 299 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 GRAMD1BQ3KR37 738 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 GTDC1Q4AE62 458 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 RUNDC3AQ59EK9 446 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 CMPK2Q5EBM0 449 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 COX20Q5RI15 118 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 BICRALQ6AI39 1079 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 FIGNL1Q6PIW4 674 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 APOOLQ6UXV4 268 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 MTDHQ86UE4 582 aaKnown RBP8.8□□□□□ -1
RABGGTA-221ENST00000561055 SLC22A16Q86VW1 577 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 FAM109AQ8N4B1 249 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 TMEM251Q8N6I4 163 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 ST6GALNAC3Q8NDV1 305 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 FBXO30Q8TB52 745 aa8.8□□□□□ -1
RABGGTA-221ENST00000561055 XAGE5Q8WWM1 108 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms