RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ITCHQ96J02 903 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 ZNF597Q96LX8 424 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 METTL7AQ9H8H3 244 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 RNPEPL1Q9HAU8 725 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 ZFP64Q9NPA5 681 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 EQTNQ9NQ60 294 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 SDHAF3Q9NRP4 125 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 EXD2Q9NVH0 621 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 NDE1Q9NXR1 346 aa12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 NKX1-2Q9UD57 310 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-209ENST00000560448 CCDC154A6NI56 674 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 TFECO14948 347 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 CIB2O75838 187 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 GLSO94925 669 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 KRT75O95678 551 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 TDGF1P3P51864 188 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 POU6F2P78424 691 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 PLGLB1Q02325 96 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 FOXO1Q12778 655 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 ART3Q13508 389 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 PRR30Q53SZ7 412 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 SAXO2Q658L1 398 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 BLOC1S3Q6QNY0 202 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 C6orf120Q7Z4R8 191 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 ANKRD46Q86W74 232 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 PRR22Q8IZ63 422 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 COX18Q8N8Q8 333 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 SLC16A11Q8NCK7 471 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 JADE3Q92613 823 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 GPR137Q96N19 417 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 ADOQ96SZ5 270 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 SLC35A5Q9BS91 424 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 OSBPL11Q9BXB4 747 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 TTTY12Q9BZ98 90 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 TRIM4Q9C037 500 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 ZDHHC11Q9H8X9 412 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 DEPPQ9NTK1 212 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 THUMPD1Q9NXG2 353 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 NTNG1Q9Y2I2 539 aa12.82□□□□□ -0.36
PKNOX1-209ENST00000560448 PRAMEF25A6NGN4 478 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 BBIP1A8MTZ0 92 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 TRIM3O75382 744 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 PDE5AO76074 875 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 ANP32DO95626 131 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 ACP2P11117 423 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 EFNA1P20827 205 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 ENDOUP21128 410 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 MATN1P21941 496 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 CHI3L1P36222 383 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 MAN2A2P49641 1150 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 DGKQP52824 942 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 GPR85P60893 370 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 DUSP5Q16690 384 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 PRAMEF20Q5VT98 475 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 RETREG3Q86VR2 466 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 SIAH3Q8IW03 269 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 GHDCQ8N2G8 530 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 OR5M3Q8NGP4 307 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 SPDL1Q96EA4 605 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 RMND5BQ96G75 393 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 CDRT15Q96T59 188 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 HOXD1Q9GZZ0 328 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 RAD21L1Q9H4I0 556 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 DCLRE1BQ9H816 532 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 POLE3Q9NRF9 147 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 KLRF1Q9NZS2 232 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 SHANK1Q9Y566 2161 aa12.81□□□□□ -0.36
PKNOX1-209ENST00000560448 A0A1W2PP18 115 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ANKUB1A6NFN9 424 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 MRASO14807 208 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 KRT36O76013 467 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 KCNK2O95069 426 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 WISP1O95388 367 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 CPSF4O95639 269 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 CAPN3P20807 821 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 PPIBP23284 216 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 EVI2BP34910 448 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 MASP1P48740 699 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 KHKP50053 298 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ST13P50502 369 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 PSME3P61289 254 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 PPIAP62937 165 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 CEACAM7Q14002 265 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 TIGD2Q4W5G0 525 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 COQ5Q5HYK3 327 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 COLEC12Q5KU26 742 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ATAD3BQ5T9A4 648 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 AP1ARQ63HQ0 302 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 ARHGAP11AQ6P4F7 1023 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 MISPQ8IVT2 679 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 CHDHQ8NE62 594 aaPredicted RBP12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 OR4N2Q8NGD1 307 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 OR5AK3PQ8NH89 298 aa12.8□□□□□ -0.36
PKNOX1-209ENST00000560448 NUDT8Q8WV74 236 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms