RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 OCMP0CE72 109 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 EFNB1P98172 346 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 TSPAN31Q12999 210 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ATP1A4Q13733 1029 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 FZD2Q14332 565 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 LARS2Q15031 903 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 TRMT12Q53H54 448 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SYT14P1Q58G82 188 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 RNLSQ5VYX0 342 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MAMSTRQ6ZN01 415 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PLEKHM3Q6ZWE6 761 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PRICKLE2Q7Z3G6 844 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ATCAYQ86WG3 371 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OOSP2Q86WS3 158 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC34A3Q8N130 599 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CAMKK1Q8N5S9 505 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CSNK1A1LQ8N752 337 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 AMER2Q8N7J2 671 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CENPOQ9BU64 300 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 TAPBPLQ9BX59 468 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 RACGAP1Q9H0H5 632 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 DSN1Q9H410 356 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PIGUQ9H490 435 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 EGLN3Q9H6Z9 239 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 IL21RQ9HBE5 538 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF232Q9UNY5 417 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 A3GALT2U3KPV4 340 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 A0A087WV62 115 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OR5K3A6NET4 321 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CYR61O00622 381 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ARHGAP33O14559 1287 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 GALR3O60755 368 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SCG5P05408 212 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CTSEP14091 401 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MAOBP27338 520 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OMPP47874 163 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PPP1CAP62136 330 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SHC2P98077 582 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 HOXC5Q00444 222 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 DOC2BQ14184 412 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 DECR1Q16698 335 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC27A4Q6P1M0 643 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF836Q6ZNA1 936 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 RRM2BQ7LG56 351 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF761Q86XN6 746 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 DRAXINQ8NBI3 349 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 TMEM52Q8NDY8 209 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OR5T3Q8NGG3 340 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PIGXQ8TBF5 258 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ACOT11Q8WXI4 607 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 FGF11Q92914 225 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 PPP1R14BQ96C90 147 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 FAM46AQ96IP4 442 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 LRR1Q96L50 414 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 OPALINQ96PE5 141 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 SDF2Q99470 211 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MCHR1Q99705 422 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 MND1Q9BWT6 205 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 RNF167Q9H6Y7 350 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 ADAP2Q9NPF8 381 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 CLEC2DQ9UHP7 191 aa13.49□□□□□ -0.25
RABGGTA-212ENST00000559974 DSCR3O14972 297 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 CSO75390 466 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 UBXN7O94888 489 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 OR5F1O95221 314 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 GPR75O95800 540 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 THBS1P07996 1170 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 ALOX5P09917 674 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 NT5EP21589 574 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 VSX2P58304 361 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 HHEXQ03014 270 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 DUSP8Q13202 625 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 SPHARQ15513 63 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 SSX1Q16384 188 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 SNAPC1Q16533 368 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 EIPR1Q53HC9 387 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 EXOSC6Q5RKV6 272 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 RASSF6Q6ZTQ3 369 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 NKAIN4Q8IVV8 208 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 CACTIN-AS1Q8N1I8 211 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 CA13Q8N1Q1 262 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 SLC41A3Q96GZ6 507 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF582Q96NG8 517 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 CCDC3Q9BQI4 270 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 ZNF350Q9GZX5 532 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 NXF2Q9GZY0 626 aaKnown RBP13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 SAP130Q9H0E3 1048 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 CNIH4Q9P003 139 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 NTNG1Q9Y2I2 539 aa13.48□□□□□ -0.25
RABGGTA-212ENST00000559974 AGAP5A6NIR3 686 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 PLOD3O60568 738 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 CKMT1AP12532 417 aa13.47□□□□□ -0.25
RABGGTA-212ENST00000559974 EEF1A1P68104 462 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms