RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 GRID1Q9ULK0 1009 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 C19orf53Q9UNZ5 99 aaPredicted RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 WBP11Q9Y2W2 641 aaKnown RBP8.26□□□□□ -1.09
HDDC3-204ENST00000559834 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
HDDC3-204ENST00000559834 OR2M5A3KFT3 312 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 MYO1GB0I1T2 1018 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SIAH2O43255 324 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 NME6O75414 186 aaPredicted RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 CNOT4O95628 575 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 IL33O95760 270 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 ENO1P06733 434 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SBK3P0C264 359 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 DDCP20711 480 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 ATP5F1P24539 256 aaPredicted RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 TIA1P31483 386 aaKnown RBP eCLIP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 NCBP2P52298 156 aaKnown RBP eCLIP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 NR1H2P55055 460 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 PKNOX1P55347 436 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 CTBP2P56545 445 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 RAE1P78406 368 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 BTKQ06187 659 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 C2orf80Q0P641 193 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 STX5Q13190 355 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 EXOC3L2Q2M3D2 409 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 UNC50Q53HI1 259 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SPDYAQ5MJ70 313 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 TCHHL1Q5QJ38 904 aaPredicted RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF678Q5SXM1 525 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 ANKRD34AQ69YU3 496 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 GTF2IRD2BQ6EKJ0 949 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SYT10Q6XYQ8 523 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SH2D5Q6ZV89 423 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF550Q7Z398 422 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 MARCH3Q86UD3 253 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 GTF2IRD2Q86UP8 949 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 CNPY4Q8N129 248 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 MMGT1Q8N4V1 131 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 METTL25Q8N6Q8 603 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 LRRN4CLQ8ND94 238 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 TMEM171Q8WVE6 324 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 C1GALT1C1Q96EU7 318 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 APIPQ96GX9 242 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 TBL1XR1Q9BZK7 514 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 IQCGQ9H095 443 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 CDC42EP4Q9H3Q1 356 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 MIEF1Q9NQG6 463 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 GLRX2Q9NS18 164 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 DDX18Q9NVP1 670 aaKnown RBP8.25□□□□□ -1.09
HDDC3-204ENST00000559834 SIRT5Q9NXA8 310 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 TAS2R7Q9NYW3 318 aa8.25□□□□□ -1.09
HDDC3-204ENST00000559834 DSCAMO60469 2012 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 A0A087WUV0 522 aaPredicted RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 SERTM1A2A2V5 107 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TRIM64A6NGJ6 449 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TRIM64BA6NI03 449 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 H0YC42 278 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 UPK1AO00322 258 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 DLX3O60479 287 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 KCNH1O95259 989 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 JUNP05412 331 aaKnown RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PAX1P15863 534 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 IL11P20809 199 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 NTSP30990 170 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 GABRA3P34903 492 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 EIF1AXP47813 144 aaKnown RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 RFX3P48380 749 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PTH2RP49190 550 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TPD52P55327 224 aaPredicted RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 CLDN20P56880 219 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PRR5P85299 388 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 ZNF763Q0D2J5 394 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 LCP2Q13094 533 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 IMPG1Q17R60 797 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PPP4R4Q6NUP7 873 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TIFABQ6ZNK6 161 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 BEND4Q6ZU67 534 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 STK32CQ86UX6 486 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PRIMA1Q86XR5 153 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 WDR75Q8IWA0 830 aaKnown RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 OR2L13Q8N349 312 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 OR5M1Q8NGP8 315 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 PPP1R14CQ8TAE6 165 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 FAM76AQ8TAV0 307 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 DCAKDQ8WVC6 231 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 IFT81Q8WYA0 676 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 ELP4Q96EB1 424 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 C11orf24Q96F05 449 aaPredicted RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 GMPPAQ96IJ6 420 aaPredicted RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 MARK4Q96L34 752 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 FMO2Q99518 471 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 EBPLQ9BY08 206 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 OR10A4Q9H209 315 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TMEM216Q9P0N5 145 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 MCTS1Q9ULC4 181 aaKnown RBP8.24□□□□□ -1.09
HDDC3-204ENST00000559834 GPR52Q9Y2T5 361 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 TIMM22Q9Y584 194 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
HDDC3-204ENST00000559834 MAP1AP78559 2803 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms