RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ARFGAP2Q8N6H7 521 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 TMCO6Q96DC7 493 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 SLC35G5Q96KT7 338 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 ZBTB18Q99592 522 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 PIGUQ9H490 435 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 GIN1Q9NXP7 522 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 BTNL2Q9UIR0 455 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 FBXL2Q9UKC9 423 aa17.07■□□□□ 0.32
CASC4-209ENST00000559222 MED12Q93074 2177 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 USP9XQ93008 2570 aaPredicted RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 TTC36A6NLP5 189 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 KCNH1O95259 989 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 UQCRC2P22695 453 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 CA7P43166 264 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 POLR2JP52435 117 aaKnown RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 POU6F2P78424 691 aaPredicted RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 UBAP2LQ14157 1087 aaKnown RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 VPS26BQ4G0F5 336 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 C4orf17Q53FE4 359 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 EIPR1Q53HC9 387 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 ZCCHC12Q6PEW1 402 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 Q6ZPB1 254 aaPredicted RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 PACS2Q86VP3 889 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 OR1J4Q8NGS1 313 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 OR4C3Q8NH37 302 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 GOT1L1Q8NHS2 421 aaPredicted RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 STACQ99469 402 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 KLHDC3Q9BQ90 382 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 SLC35A5Q9BS91 424 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 ZNF385DQ9H6B1 395 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 DUSP22Q9NRW4 184 aa17.06■□□□□ 0.32
CASC4-209ENST00000559222 FAF1Q9UNN5 650 aaPredicted RBP17.06■□□□□ 0.32
CASC4-209ENST00000559222 A0A0G2JND7 137 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 AGFG2O95081 481 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 OXSR1O95747 527 aaPredicted RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 ABOP16442 354 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 MATN1P21941 496 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 TCEA1P23193 301 aaKnown RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 MRPL19P49406 292 aaKnown RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 PSPHP78330 225 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 FUT5Q11128 374 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 SNTA1Q13424 505 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 SLC10A1Q14973 349 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.05■□□□□ 0.32
CASC4-209ENST00000559222 EMC4Q5J8M3 183 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 DCST2Q5T1A1 773 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 TNFAIP8L2Q6P589 184 aaPredicted RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 SLC2A7Q6PXP3 512 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 YRDCQ86U90 279 aaKnown RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 CD163Q86VB7 1156 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 RPRMLQ8N4K4 120 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 GATSQ8NAP1 163 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 GLB1L3Q8NCI6 653 aaPredicted RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 PNPT1Q8TCS8 783 aaKnown RBP17.05■□□□□ 0.32
CASC4-209ENST00000559222 ADAMTS15Q8TE58 950 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 RAB8BQ92930 207 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 MOAP1Q96BY2 351 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 PANX1Q96RD7 426 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 TMEM120AQ9BXJ8 343 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 OR51I1Q9H343 314 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 SLC52A3Q9NQ40 469 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 PCDHGB4Q9UN71 923 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 SLC6A5Q9Y345 797 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 KIAA1549Q9HCM3 1950 aa17.05■□□□□ 0.32
CASC4-209ENST00000559222 FAM234BA2RU67 622 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 CCDC154A6NI56 674 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 NPIPA2E9PIF3 369 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 NPIPA3F8WFD2 350 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 LDLRP01130 860 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 CAPN3P20807 821 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 PTGS2P35354 604 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 MDH1P40925 334 aaKnown RBP17.04■□□□□ 0.32
CASC4-209ENST00000559222 RBPJQ06330 500 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 WIPI1Q5MNZ9 446 aaPredicted RBP17.04■□□□□ 0.32
CASC4-209ENST00000559222 COX20Q5RI15 118 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 DCST1Q5T197 706 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 DOLPP1Q86YN1 238 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 FAM83FQ8NEG4 500 aaPredicted RBP17.04■□□□□ 0.32
CASC4-209ENST00000559222 VPS37AQ8NEZ2 397 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 OR5M9Q8NGP3 310 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 FAM57AQ8TBR7 257 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 NEURL3Q96EH8 262 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
CASC4-209ENST00000559222 PHF12Q96QT6 1004 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 PNPLA3Q9NST1 481 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 CCDC167Q9P0B6 97 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 SLC5A6Q9Y289 635 aa17.04■□□□□ 0.32
CASC4-209ENST00000559222 MYO7BQ6PIF6 2116 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 DOPEY2Q9Y3R5 2298 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 TRGV5A0A0B4J1U4 118 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 CENPVL1A0A0U1RR11 272 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 A0A1B0GVC2 190 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 PRAMEF27A3QJZ7 478 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 NR5A2O00482 541 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 GMFGO60234 142 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 TRAPPC6AO75865 159 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 IL6P05231 212 aa17.03■□□□□ 0.32
CASC4-209ENST00000559222 HPNP05981 417 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms