RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RBM24Q9BX46 236 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 DNTTIP1Q9H147 329 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 EPOP01588 193 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ALDOAP04075 364 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 GIFP27352 417 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 KCNJ8Q15842 424 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ZFP82Q8N141 532 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 RSC1A1Q92681 617 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 HOXB13Q92826 284 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 PELOQ9BRX2 385 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 TMEM175Q9BSA9 504 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 TESQ9UGI8 421 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 SGK494L7N484 410 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SNAPINO95295 136 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SOD2P04179 222 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 NDUFV2P19404 249 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ACRV1P26436 265 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
SPG11-210ENST00000558319 ELF4Q99607 663 aaPredicted RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 GOLGA4Q13439 2230 aaKnown RBP13.23□□□□□ -0.29
SPG11-210ENST00000558319 RAB27BO00194 218 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CDK4P11802 303 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SGSHP51688 502 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 GK3PQ14409 553 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 AARDQ4LEZ3 155 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CNEP1R1Q8N9A8 125 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ATP6V1G2-DDX39BF2Z307 99 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 LRRTM2O43300 516 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 DUX1O43812 170 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 PPP1R3DO95685 299 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CD1DP15813 335 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CD6P30203 668 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CX3CR1P49238 355 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TECRLQ5HYJ1 363 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 NTAN1Q96AB6 310 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ITPKCQ96DU7 683 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 LINC00597Q9H2U6 94 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 PDE7BQ9NP56 450 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SMLR1H3BR10 107 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 FECHP22830 423 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CD70P32970 193 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 HHEXQ03014 270 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 UPP1Q16831 310 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TMEM173Q86WV6 379 aaPredicted RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 GPR137CQ8N3F9 429 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 GOLM1Q8NBJ4 401 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CHST14Q8NCH0 376 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 PAPD5Q8NDF8 572 aaKnown RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 CREBZFQ9NS37 354 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 MARCH4Q9P2E8 410 aaPredicted RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SLC22A31A6NKX4 558 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 F5H5K5 113 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 MED6O75586 246 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CRTAPO75718 401 aaPredicted RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 TPT1P13693 172 aaKnown RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 ABOP16442 354 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SOX4Q06945 474 aaPredicted RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 CDK5R2Q13319 367 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 OR2A12Q8NGT7 310 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 NR4A3Q92570 626 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 OR5B2Q96R09 309 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 INPP5KQ9BT40 448 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 FAM234AQ9H0X4 552 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 APMAPQ9HDC9 416 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 TMEM248Q9NWD8 314 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 NUDT21O43809 227 aaKnown RBP13.22□□□□□ -0.29
SPG11-210ENST00000558319 PRAMEF11O60813 436 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 HTR3BO95264 441 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 IL20RBQ6UXL0 311 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 CD163Q86VB7 1156 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 OR9K2Q8NGE7 335 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 SLC38A1Q9H2H9 487 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 ENPP5Q9UJA9 477 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
SPG11-210ENST00000558319 DCDC2BA2VCK2 349 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 RAB3DO95716 219 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 UBE2NP61088 152 aaKnown RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 PQLC3Q8N755 202 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 OR5W2Q8NH69 310 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ZNF461Q8TAF7 563 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.21□□□□□ -0.29
SPG11-210ENST00000558319 RDH14Q9HBH5 336 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 ACKR4Q9NPB9 350 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 PMM2O15305 246 aa13.21□□□□□ -0.29
SPG11-210ENST00000558319 FRS3O43559 492 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms