RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HSP90B2PQ58FF3 399 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 SPANXN4Q5MJ08 99 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 FNDC7Q5VTL7 733 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 CDC73Q6P1J9 531 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 EPGNQ6UW88 154 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 MAVSQ7Z434 540 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 FGD2Q7Z6J4 655 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 CD163Q86VB7 1156 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 ARFGAP2Q8N6H7 521 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 COX18Q8N8Q8 333 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 SLC16A11Q8NCK7 471 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 OR4A15Q8NGL6 344 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 ADAMTS15Q8TE58 950 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 PIK3R3Q92569 461 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 JADE3Q92613 823 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 CHMP6Q96FZ7 201 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-211ENST00000557623 GNRHR2Q96P88 292 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 G6PC3Q9BUM1 346 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 UBQLN3Q9H347 655 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 TP63Q9H3D4 680 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-211ENST00000557623 PIGUQ9H490 435 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 GALNT9Q9HCQ5 603 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 ZNF446Q9NWS9 450 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 TINAGQ9UJW2 476 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 PCDHGB3Q9Y5G1 929 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
SLIRP-211ENST00000557623 DIDO1Q9BTC0 2240 aaKnown RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 GXYLT2A0PJZ3 443 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 DUXAA6NLW8 204 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 NPIPA2E9PIF3 369 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 E9PLN8 166 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 NPIPA3F8WFD2 350 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 UBDO15205 165 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 POLR3GO15318 223 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 GCKP35557 465 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 NME5P56597 212 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 POU6F2P78424 691 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 FAM174BQ3ZCQ3 159 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 EXOSC6Q5RKV6 272 aaKnown RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 WLSQ5T9L3 541 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 RPTNQ6XPR3 784 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 PLCZ1Q86YW0 608 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 CLECL1Q8IZS7 167 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 NEIL3Q8TAT5 605 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 FBXO30Q8TB52 745 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 FAM110BQ8TC76 370 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 PHF10Q8WUB8 498 aaKnown RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 C16orf58Q96GQ5 468 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 OR52B2Q96RD2 323 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 OCSTAMPQ9BR26 566 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 YIPF4Q9BSR8 244 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 CCDC28BQ9BUN5 200 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 BTBD2Q9BX70 525 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 GPATCH2Q9NW75 528 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 ZIM2Q9NZV7 527 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 PPP4R1LQ9P1A2 415 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 BTNL2Q9UIR0 455 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 ACAD8Q9UKU7 415 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 MEMO1Q9Y316 297 aa11.4□□□□□ -0.58
SLIRP-211ENST00000557623 NCOA6Q14686 2063 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-211ENST00000557623 DOPEY2Q9Y3R5 2298 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 RNF103-CHMP3A0A140T963 221 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 FIGNL2A6NMB9 653 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 ZNHIT1O43257 154 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 ATP8B1O43520 1251 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SCO2O43819 266 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 FADS1O60427 444 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SCN2BO60939 215 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SLC22A3O75751 556 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 KCNK2O95069 426 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 UTS2O95399 124 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 CPSF4O95639 269 aaKnown RBP11.39□□□□□ -0.59
SLIRP-211ENST00000557623 IL6P05231 212 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 PGRP06401 933 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 MATN1P21941 496 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 UQCRC2P22695 453 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SMSP52788 366 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 GAS1P54826 345 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 PHC1P78364 1004 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 IRX1P78414 480 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-211ENST00000557623 GXYLT1Q4G148 440 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 TMEM211Q6ICI0 200 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 C6orf120Q7Z4R8 191 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 ANKRD46Q86W74 232 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 MIER2Q8N344 545 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 TRIML2Q8N7C3 387 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 WDSUB1Q8N9V3 476 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 OR5AK3PQ8NH89 298 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 CDS1Q92903 461 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 CCDC120Q96HB5 630 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 SLC35G5Q96KT7 338 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 TEX37Q96LM6 180 aa11.39□□□□□ -0.59
SLIRP-211ENST00000557623 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms