RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MRPL46Q9H2W6 279 aaKnown RBP12.65□□□□□ -0.38
SLIRP-210ENST00000557431 ELOVL5Q9NYP7 299 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 TMCO1Q9UM00 188 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
SLIRP-210ENST00000557431 GXYLT2A0PJZ3 443 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 EIF1AYO14602 144 aaKnown RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 KLF4O43474 513 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 BCAS2O75934 225 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 IGKV1D-16P01601 117 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 CD8BP10966 210 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 PHBP35232 272 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 NCBP2P52298 156 aaKnown RBP eCLIP12.64□□□□□ -0.397e-14■■■□□ 15.3
SLIRP-210ENST00000557431 EEF1A1P68104 462 aaKnown RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 ACSM2AQ08AH3 577 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 GUSBP1Q15486 140 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 SGCBQ16585 318 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 EEF1A1P5Q5VTE0 462 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 ACSM2BQ68CK6 577 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 PRSS57Q6UWY2 283 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 APOOLQ6UXV4 268 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF704Q6ZNC4 412 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 C20orf204Q6ZNR8 217 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 PLEKHM3Q6ZWE6 761 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 CXXC5Q7LFL8 322 aaKnown RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 GGNQ86UU5 652 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 CEP112Q8N8E3 955 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 GATSQ8NAP1 163 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 DCAKDQ8WVC6 231 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 C1GALT1C1Q96EU7 318 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 C16orf45Q96MC5 204 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-210ENST00000557431 SLC39A3Q9BRY0 314 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 GIMAP4Q9NUV9 329 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 TMEM216Q9P0N5 145 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 CUBNO60494 3623 aa12.64□□□□□ -0.39
SLIRP-210ENST00000557431 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 PLOD3O60568 738 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TNFRSF21O75509 655 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 NTN1O95631 604 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 KRT6AP02538 564 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 KRT6BP04259 564 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 EIF1AXP47813 144 aaKnown RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 KRT6CP48668 564 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 FOXA1P55317 472 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 C2orf80Q0P641 193 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 CSTF3Q12996 717 aaKnown RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TNK1Q13470 666 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 CAPRIN1Q14444 709 aaKnown RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 CTU2Q2VPK5 515 aaKnown RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF678Q5SXM1 525 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 C8orf74Q6P047 294 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 GPRIN3Q6ZVF9 776 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF572Q7Z3I7 529 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 METTL25Q8N6Q8 603 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 GBP7Q8N8V2 638 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 FBXO30Q8TB52 745 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 METTL6Q8TCB7 284 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TMEM171Q8WVE6 324 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 PIK3R3Q92569 461 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 PLPPR2Q96GM1 343 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 C1QTNF3Q9BXJ4 246 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 PRRG4Q9BZD6 226 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 C12orf49Q9H741 205 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TMEM185BQ9H7F4 350 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 EQTNQ9NQ60 294 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 NMRK1Q9NWW6 199 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
SLIRP-210ENST00000557431 POLR3HQ9Y535 204 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-210ENST00000557431 MYO1GB0I1T2 1018 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 DLX3O60479 287 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 UTS2O95399 124 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 ANXA4P09525 319 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-210ENST00000557431 ATP5J2P56134 94 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 RPS3AP61247 264 aaKnown RBP12.62□□□□□ -0.39
SLIRP-210ENST00000557431 RASA2Q15283 850 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 BEX5Q5H9J7 111 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 FAM214BQ7L5A3 538 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 ATG4DQ86TL0 474 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-210ENST00000557431 EXOC3L1Q86VI1 746 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
SLIRP-210ENST00000557431 ZNF175Q9Y473 711 aa12.62□□□□□ -0.39
SLIRP-210ENST00000557431 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 UPK1AO00322 258 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 CXCL13O43927 109 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 COQ9O75208 318 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ULK1O75385 1050 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 ANGPTL1O95841 491 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 HSD3B1P14060 373 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 HSD3B2P26439 372 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 MPIP34949 423 aa12.61□□□□□ -0.39
SLIRP-210ENST00000557431 SERPINB9P50453 376 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms