RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ZNF619Q8N2I2 560 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 OR52B6Q8NGF0 335 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 OR10D3Q8NH80 312 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 GFM2Q969S9 779 aaKnown RBP11.16□□□□□ -0.62
PSEN1-221ENST00000557293 OSBPL9Q96SU4 736 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 CPNE1Q99829 537 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 TACO1Q9BSH4 297 aaKnown RBP11.16□□□□□ -0.62
PSEN1-221ENST00000557293 HDHD5Q9BXW7 423 aa11.16□□□□□ -0.62
PSEN1-221ENST00000557293 CISD1Q9NZ45 108 aaKnown RBP11.16□□□□□ -0.62
PSEN1-221ENST00000557293 A0A0J9YW62 118 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 EIF1AYO14602 144 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 CXCL13O43927 109 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 SEC31AO94979 1220 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 CLDN9O95484 217 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 OPN1LWP04000 364 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 LTA4HP09960 611 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 PSMA4P25789 261 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 IL12BP29460 328 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 AGTR1P30556 359 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 GP5P40197 560 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 GANABQ14697 944 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 FRG2Q64ET8 278 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 CYS1Q717R9 158 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 GALNT10Q86SR1 603 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 RHEBL1Q8TAI7 183 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 KCTD4Q8WVF5 259 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 HSD17B8Q92506 261 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 KLHL29Q96CT2 875 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 ERP27Q96DN0 273 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 FRG2BQ96QU4 278 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 PRRG4Q9BZD6 226 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 FARSBQ9NSD9 589 aaKnown RBP11.15□□□□□ -0.62
PSEN1-221ENST00000557293 AHSPQ9NZD4 102 aa11.15□□□□□ -0.62
PSEN1-221ENST00000557293 IGLV3-32A0A0A0MS00 114 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 PLOD3O60568 738 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 BCAS2O75934 225 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 PLGP00747 810 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 SRD5A1P18405 259 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 KRT20P35900 424 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 ALDH18A1P54886 795 aaKnown RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 DSCR9P59020 149 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 IRF9Q00978 393 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 STX5Q13190 355 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 NRF1Q16656 503 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 UBAP2Q5T6F2 1119 aaKnown RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 LGSNQ5TDP6 509 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 TFAP2EQ6VUC0 442 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 PAGE2Q7Z2X7 111 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 ZBED8Q8IZ13 594 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 OR7G2Q8NG99 324 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 OR9A2Q8NGT5 310 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 HTRA1Q92743 480 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 GPR78Q96P69 363 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 KLHDC3Q9BQ90 382 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 PTGES2Q9H7Z7 377 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 NOL11Q9H8H0 719 aaKnown RBP11.14□□□□□ -0.63
PSEN1-221ENST00000557293 L2HGDHQ9H9P8 463 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 FANCFQ9NPI8 374 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 SDHAF3Q9NRP4 125 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 XPR1Q9UBH6 696 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 PSME2Q9UL46 239 aa11.14□□□□□ -0.63
PSEN1-221ENST00000557293 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 TCRBV9S1A1TA0A576 114 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 SPRY1O43609 319 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-221ENST00000557293 GUCY1B2O75343 617 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 PGRP06401 933 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 TUBBP07437 444 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 SLC25A16P16260 332 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 SPRP35270 261 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-221ENST00000557293 NUDT6P53370 316 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 TRAF3Q13114 568 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 PRSS53Q2L4Q9 553 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 FAM120AOSQ5T036 256 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 GRTP1Q5TC63 336 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 PPP4R4Q6NUP7 873 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 EXOC3L1Q86VI1 746 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF525Q8N782 197 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 C10orf105Q8TEF2 133 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 CACNG6Q9BXT2 260 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 NGBQ9NPG2 151 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
PSEN1-221ENST00000557293 NPAP1Q9NZP6 1156 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 UTS2RQ9UKP6 389 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 ABCG2Q9UNQ0 655 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 PPP2R2CQ9Y2T4 447 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 ZNF780BQ9Y6R6 833 aa11.13□□□□□ -0.63
PSEN1-221ENST00000557293 GOLGA8QA0A0J9YX86 632 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 GOLGA8OA6NCC3 632 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 SYCE1LA8MT33 242 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 E7EQL1 145 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 GOLGA8NF8WBI6 632 aa11.12□□□□□ -0.63
PSEN1-221ENST00000557293 GOLGA8RI6L899 631 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms