RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 GXYLT1Q4G148 440 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 FIGNL1Q6PIW4 674 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 TRIML2Q8N7C3 387 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 COX18Q8N8Q8 333 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 WDSUB1Q8N9V3 476 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 OR5AK3PQ8NH89 298 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 GOT1L1Q8NHS2 421 aaPredicted RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 NEIL3Q8TAT5 605 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 STON2Q8WXE9 905 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 CDS1Q92903 461 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 CHMP6Q96FZ7 201 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 MARK4Q96L34 752 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 CCDC115Q96NT0 180 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 OR7D2Q96RA2 312 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 PANX1Q96RD7 426 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 EBF4Q9BQW3 602 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 SIKE1Q9BRV8 207 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 HHATLQ9HCP6 504 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 UBQLN4Q9NRR5 601 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 SH3BGRL2Q9UJC5 107 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 MEMO1Q9Y316 297 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 MRPS18CQ9Y3D5 142 aaKnown RBP9.75□□□□□ -0.85
LINC00239-201ENST00000556973 LIPGQ9Y5X9 500 aa9.75□□□□□ -0.85
LINC00239-201ENST00000556973 RNF103-CHMP3A0A140T963 221 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 CCDC154A6NI56 674 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 E9PLN8 166 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 AGR2O95994 175 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 NGFRP08138 427 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 HPGDP15428 266 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 TBXA2RP21731 343 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 CHI3L1P36222 383 aaPredicted RBP9.74□□□□□ -0.85
LINC00239-201ENST00000556973 GRAMD1BQ3KR37 738 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 NHSL2Q5HYW2 709 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 WLSQ5T9L3 541 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 OR5M10Q6IEU7 315 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 MARCH3Q86UD3 253 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 CLEC4FQ8N1N0 589 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 OR4C3Q8NH37 302 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 FBXO30Q8TB52 745 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 MIPOL1Q8TD10 442 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 DUSP19Q8WTR2 217 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 OTUB1Q96FW1 271 aaPredicted RBP9.74□□□□□ -0.85
LINC00239-201ENST00000556973 SLC35G5Q96KT7 338 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 VKORC1Q9BQB6 163 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 TBL1XR1Q9BZK7 514 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 HOXD1Q9GZZ0 328 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 TP63Q9H3D4 680 aaPredicted RBP9.74□□□□□ -0.85
LINC00239-201ENST00000556973 RMND5AQ9H871 391 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 SERHLQ9NQF3 203 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 FLRT3Q9NZU0 649 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 PPP4R1LQ9P1A2 415 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 ACAD8Q9UKU7 415 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 HRH3Q9Y5N1 445 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 HELZ2Q9BYK8 2649 aaKnown RBP9.74□□□□□ -0.85
LINC00239-201ENST00000556973 FREM3P0C091 2139 aa9.74□□□□□ -0.85
LINC00239-201ENST00000556973 PRRC2CQ9Y520 2896 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FASNP49327 2511 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 A0A1W2PQD3 144 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FAM234BA2RU67 622 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 C9JVG2 144 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SCDO00767 359 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 RFXANKO14593 260 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ADAM10O14672 748 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 NDUFB5O43674 189 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SCO2O43819 266 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 OXSR1O95747 527 aaPredicted RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ANGPTL1O95841 491 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 AK1P00568 194 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 HOXD4P09016 255 aaPredicted RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 GABRA1P14867 456 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ATP6V1C1P21283 382 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SRD5A2P31213 254 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 GCKP35557 465 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ZFP36L2P47974 494 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TRPC1P48995 793 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ATP4BP51164 291 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 DSCR4P56555 118 aaPredicted RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TXNL4AP83876 142 aaKnown RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ARHGAP11BQ3KRB8 267 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 EIPR1Q53HC9 387 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 EMC4Q5J8M3 183 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 WIPI1Q5MNZ9 446 aaPredicted RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 DCST2Q5T1A1 773 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 CCNJQ5T5M9 372 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 METTL21CQ5VZV1 264 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 SAXO2Q658L1 398 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 VASNQ6EMK4 673 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 TMEM211Q6ICI0 200 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 APOOLQ6UXV4 268 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 RPTNQ6XPR3 784 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 ZNF621Q6ZSS3 439 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 MSANTD1Q6ZTZ1 278 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 CD163Q86VB7 1156 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 MISPQ8IVT2 679 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FADS6Q8N9I5 356 aa9.73□□□□□ -0.85
LINC00239-201ENST00000556973 FAM83FQ8NEG4 500 aaPredicted RBP9.73□□□□□ -0.85
LINC00239-201ENST00000556973 OR2M3Q8NG83 312 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms