RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
SHMT2-225ENST00000556798 SLC30A6Q6NXT4 461 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 TMEM81Q6P7N7 255 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 RETREG3Q86VR2 466 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 MSRB3Q8IXL7 192 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 OR52N2Q8NGI0 321 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 PHF12Q96QT6 1004 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 TPT1P8Q9HAU6 139 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 IL1RL2Q9HB29 575 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 SLC25A37Q9NYZ2 338 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 NDUFAF1Q9Y375 327 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 PCDHB14Q9Y5E9 798 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 ESPL1Q14674 2120 aa16■□□□□ 0.15
SHMT2-225ENST00000556798 DUXAA6NLW8 204 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 SNX4O95219 450 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 KRT75O95678 551 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 SNRPB2P08579 225 aaKnown RBP15.99■□□□□ 0.15
SHMT2-225ENST00000556798 RFPL3SP0C7P2 107 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 MAGEA5P43359 124 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 UQCRFS1P47985 274 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 FUT5Q11128 374 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 STX5Q13190 355 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 MRPL49Q13405 166 aaKnown RBP15.99■□□□□ 0.15
SHMT2-225ENST00000556798 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.99■□□□□ 0.15
SHMT2-225ENST00000556798 LRIF1Q5T3J3 769 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 FNDC7Q5VTL7 733 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 C16orf62Q7Z3J2 963 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 PACS2Q86VP3 889 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 SLC22A16Q86VW1 577 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 TMEM251Q8N6I4 163 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 RNF138Q8WVD3 245 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 XAGE5Q8WWM1 108 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 NTNG2Q96CW9 530 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 TMEM41AQ96HV5 264 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 G6PC3Q9BUM1 346 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 RTN4RQ9BZR6 473 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 ZNF703Q9H7S9 590 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-225ENST00000556798 ZFP64Q9NPA5 681 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 VAPAQ9P0L0 249 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 LEF1Q9UJU2 399 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-225ENST00000556798 PCDHGB3Q9Y5G1 929 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 WIF1Q9Y5W5 379 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 CAPN7Q9Y6W3 813 aa15.99■□□□□ 0.15
SHMT2-225ENST00000556798 HMGN4O00479 90 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 ADAM10O14672 748 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 ASNA1O43681 348 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 FADS1O60427 444 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 CDC40O60508 579 aaKnown RBP eCLIP15.98■□□□□ 0.15
SHMT2-225ENST00000556798 UNC5CO95185 931 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 OXSR1O95747 527 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-225ENST00000556798 CELA3AP09093 270 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 EDN3P14138 238 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 ATP6V1C1P21283 382 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 RNF144AP50876 292 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-225ENST00000556798 MVDP53602 400 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 GAS1P54826 345 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 HSF1Q00613 529 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 SNTA1Q13424 505 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 OR5M10Q6IEU7 315 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 APOOLQ6UXV4 268 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 MTDHQ86UE4 582 aaKnown RBP15.98■□□□□ 0.15
SHMT2-225ENST00000556798 ATCAYQ86WG3 371 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 SNX32Q86XE0 403 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 OR4C3Q8NH37 302 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 GPR137Q96N19 417 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 GNRHR2Q96P88 292 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 DEFB127Q9H1M4 99 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 EXD2Q9NVH0 621 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 SEC14L3Q9UDX4 400 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 ABCG2Q9UNQ0 655 aa15.98■□□□□ 0.15
SHMT2-225ENST00000556798 PRAMEF27A3QJZ7 478 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 CLIC1O00299 241 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 FBP2O00757 339 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 SNPHO15079 494 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ZNHIT1O43257 154 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 PDE9AO76083 593 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ZIC2O95409 532 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-225ENST00000556798 CBX6O95503 412 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ETFAP13804 333 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 GNLYP22749 145 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 CRATP43155 626 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 HYAL4Q2M3T9 481 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ARHGAP11BQ3KRB8 267 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 FLYWCH1Q4VC44 716 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 CMPK2Q5EBM0 449 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ATAD3BQ5T9A4 648 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 HEPHL1Q6MZM0 1159 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 DLEU7Q6UYE1 221 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 DHDDSQ86SQ9 333 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 MARCH3Q86UD3 253 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 FAM109AQ8N4B1 249 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 WDSUB1Q8N9V3 476 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 GATSQ8NAP1 163 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 GALNT11Q8NCW6 608 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 ST6GALNAC3Q8NDV1 305 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 CHDHQ8NE62 594 aaPredicted RBP15.97■□□□□ 0.15
SHMT2-225ENST00000556798 OR1J4Q8NGS1 313 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 TSPEARQ8WU66 669 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 SDF2Q99470 211 aa15.97■□□□□ 0.15
SHMT2-225ENST00000556798 TBL1XR1Q9BZK7 514 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms