RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 PPP2R2DQ66LE6 453 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 C18orf63Q68DL7 685 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MRM1Q6IN84 353 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 SLC30A6Q6NXT4 461 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 CD200R1LQ6Q8B3 271 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PLET1Q6UQ28 207 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 WASH2PQ6VEQ5 465 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 SHFQ7M4L6 423 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PRICKLE2Q7Z3G6 844 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 LHFPL3Q86UP9 236 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RANBP3LQ86VV4 465 aaPredicted RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 MEX3DQ86XN8 651 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 VRK2Q86Y07 508 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 GID4Q8IVV7 300 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 GALNT12Q8IXK2 581 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PEX5LQ8IYB4 626 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RDH10Q8IZV5 341 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 Q8N402 240 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 HDDC3Q8N4P3 179 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 Q8N9G6 341 aaPredicted RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 ASCC1Q8N9N2 400 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 POGLUT1Q8NBL1 392 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MFSD9Q8NBP5 474 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TMEM145Q8NBT3 493 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 ATP6V1C2Q8NEY4 427 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 OR2T33Q8NG76 320 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 OR8D4Q8NGM9 314 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 NEIL3Q8TAT5 605 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 GANCQ8TET4 914 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 UBASH3BQ8TF42 649 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TM9SF4Q92544 642 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 DIO2Q92813 273 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 FGF11Q92914 225 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 OTULINQ96BN8 352 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MS4A4EQ96PG1 132 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MCHR1Q99705 422 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MACROD1Q9BQ69 325 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TMED9Q9BVK6 235 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 AICDAQ9GZX7 198 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 C11orf54Q9H0W9 315 aaPredicted RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 MMP28Q9H239 520 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 SLC38A1Q9H2H9 487 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 KCNN2Q9H2S1 579 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 RNF121Q9H920 327 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 TBC1D17Q9HA65 648 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 SLC6A20Q9NP91 592 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 ZDHHC4Q9NPG8 344 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 PRDM7Q9NQW5 492 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 MBNL1Q9NR56 388 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 YARS2Q9Y2Z4 477 aaKnown RBP6.55□□□□□ -1.36
TDP1-213ENST00000555880 GPSM3Q9Y4H4 160 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 CDH10Q9Y6N8 788 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 COLEC10Q9Y6Z7 277 aa6.55□□□□□ -1.36
TDP1-213ENST00000555880 LAMA2P24043 3122 aaKnown RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 SMIM30A4D0T7 59 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 PRR23AA6NEV1 266 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 OR52A4PA6NMU1 304 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ISM1B1AKI9 464 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 FAM25AB3EWG3 89 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 FAM25CB3EWG5 89 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 FAM25GB3EWG6 89 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 C5orf67F2Z3F1 127 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 SEC14L5O43304 696 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 PROM1O43490 865 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 LATO43561 262 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 SLC19A2O60779 497 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 KAT7O95251 611 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 CH25HO95992 272 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 GAAP10253 952 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 CELP19835 753 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 PAICSP22234 425 aaKnown RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 HTR1FP30939 366 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 GPR4P46093 362 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 MAP2K3P46734 347 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 OMPP47874 163 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 BTN3A2P78410 334 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 IFITM2Q01629 132 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ACSM1Q08AH1 577 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 IL18Q14116 193 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 FLYWCH1Q4VC44 716 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 CDC73Q6P1J9 531 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 MRPL14Q6P1L8 145 aaKnown RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 CNIH2Q6PI25 160 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 VITQ6UXI7 678 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 MBOAT2Q6ZWT7 520 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 UBE2Q1Q7Z7E8 422 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ADGRD2Q7Z7M1 963 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 MARCH9Q86YJ5 346 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 FAM20CQ8IXL6 584 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 NRMQ8IXM6 262 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 YAF2Q8IY57 180 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 LRRC25Q8N386 305 aaPredicted RBP6.54□□□□□ -1.36
TDP1-213ENST00000555880 ZFP41Q8N8Y5 198 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 OR52L1Q8NGH7 329 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 OR52N1Q8NH53 320 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 KAT2AQ92830 837 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 GAL3ST3Q96A11 431 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 SLC41A3Q96GZ6 507 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 ST6GAL2Q96JF0 529 aa6.54□□□□□ -1.36
TDP1-213ENST00000555880 DMRTB1Q96MA1 342 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms