RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 TESCQ96BS2 214 aa12.5□□□□□ -0.41
SHMT2-219ENST00000555563 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
SHMT2-219ENST00000555563 AIG1Q9NVV5 245 aa12.5□□□□□ -0.41
SHMT2-219ENST00000555563 SLC6A5Q9Y345 797 aa12.5□□□□□ -0.41
SHMT2-219ENST00000555563 FAM215AQ9Y5M1 114 aa12.5□□□□□ -0.41
SHMT2-219ENST00000555563 C9JVG2 144 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 PRSS44E7EML9 344 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 RNASET2O00584 256 aaKnown RBP12.49□□□□□ -0.41
SHMT2-219ENST00000555563 FADS1O60427 444 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 WDR1O75083 606 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 CBR3O75828 277 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 AGAP20933 346 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 CLNS1AP54105 237 aaKnown RBP12.49□□□□□ -0.41
SHMT2-219ENST00000555563 NME5P56597 212 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 PHC1P78364 1004 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 ART3Q13508 389 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 SPANXN4Q5MJ08 99 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 DCST1Q5T197 706 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 CCNJQ5T5M9 372 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 FIGNL1Q6PIW4 674 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 SPATA19Q7Z5L4 167 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 ZAR1Q86SH2 424 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 ANKRD46Q86W74 232 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 CDS1Q92903 461 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 CHMP6Q96FZ7 201 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 MAELQ96JY0 434 aaKnown RBP12.49□□□□□ -0.41
SHMT2-219ENST00000555563 TEX37Q96LM6 180 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 ACTRT3Q9BYD9 372 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 OR2B2Q9GZK3 357 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 GPATCH2Q9NW75 528 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 PPP4R1LQ9P1A2 415 aa12.49□□□□□ -0.41
SHMT2-219ENST00000555563 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 ZNF195O14628 629 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 SCN2BO60939 215 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 KCNK2O95069 426 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FREM3P0C091 2139 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 NUP107P57740 925 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 UFM1P61960 85 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 RPS26P62854 115 aaKnown RBP12.48□□□□□ -0.41
SHMT2-219ENST00000555563 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHMT2-219ENST00000555563 DPY19L1Q2PZI1 675 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FAM174BQ3ZCQ3 159 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 SLC9B1Q4ZJI4 515 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 C1orf185Q5T7R7 199 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 VASNQ6EMK4 673 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 TMEM211Q6ICI0 200 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 CDC73Q6P1J9 531 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 B3GNT6Q6ZMB0 384 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 MARCH3Q86UD3 253 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 CLEC4FQ8N1N0 589 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FADS6Q8N9I5 356 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 OR4A15Q8NGL6 344 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 OR14L1PQ8NHC6 308 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FAM110BQ8TC76 370 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 LRRC8CQ8TDW0 803 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 MOAP1Q96BY2 351 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 SDCCAG3Q96C92 435 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 MARK4Q96L34 752 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 C7orf26Q96N11 449 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 STACQ99469 402 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 TIMP4Q99727 224 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 BTBD2Q9BX70 525 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 UGT2B28Q9BY64 529 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 TBL1XR1Q9BZK7 514 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 PIGUQ9H490 435 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 SLCO1B3Q9NPD5 702 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 DUSP22Q9NRW4 184 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FBXO34Q9NWN3 711 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 DKKL1Q9UK85 242 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 FAF1Q9UNN5 650 aaPredicted RBP12.48□□□□□ -0.41
SHMT2-219ENST00000555563 GPR45Q9Y5Y3 372 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
SHMT2-219ENST00000555563 DIAPH2O60879 1101 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 OXSR1O95747 527 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 KRT16P08779 473 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 GABRA1P14867 456 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 BMP7P18075 431 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 TCEA1P23193 301 aaKnown RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 GRNP28799 593 aaKnown RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 IL12AP29459 219 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 SRD5A2P31213 254 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 S100A3P33764 101 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 DCTP40126 519 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PPP2R2AP63151 447 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 POU6F2P78424 691 aaPredicted RBP12.47□□□□□ -0.41
SHMT2-219ENST00000555563 PMPCAQ10713 525 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 APOOLQ6UXV4 268 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 ULK2Q8IYT8 1036 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 OR2M3Q8NG83 312 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 OR5D16Q8NGK9 328 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 OR4C3Q8NH37 302 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 ACTRT2Q8TDY3 377 aa12.47□□□□□ -0.41
SHMT2-219ENST00000555563 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms