RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TRIM45Q9H8W5 580 aaPredicted RBP22.61■■□□□ 1.21
TMEM260-207ENST00000555497 B3GNT3Q9Y2A9 372 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SLC9B1P1A6NJY1 282 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 CSO75390 466 aaKnown RBP22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SULT1C4O75897 302 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 LARS2Q15031 903 aaKnown RBP22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SNAPC1Q16533 368 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 DECR1Q16698 335 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 DCDC5Q6ZRR9 648 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 SNX29P2Q8IUI4 249 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 GJD3Q8N144 294 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 TBCCD1Q9NVR7 557 aa22.61■■□□□ 1.21
TMEM260-207ENST00000555497 PEX12O00623 359 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 RPS4Y1P22090 263 aaKnown RBP22.6■■□□□ 1.21
TMEM260-207ENST00000555497 MAP3K8P41279 467 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 BLKP51451 505 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 TUBA1BP68363 451 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 INAQ16352 499 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 RASSF6Q6ZTQ3 369 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 USP43Q70EL4 1123 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 TUBA1AQ71U36 451 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 MRGPREQ86SM8 312 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 C19orf47Q8N9M1 422 aaKnown RBP22.6■■□□□ 1.21
TMEM260-207ENST00000555497 MCFD2Q8NI22 146 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 PIGXQ8TBF5 258 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 ACOT11Q8WXI4 607 aaPredicted RBP22.6■■□□□ 1.21
TMEM260-207ENST00000555497 CTHRC1Q96CG8 243 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 PHF7Q9BWX1 381 aaPredicted RBP22.6■■□□□ 1.21
TMEM260-207ENST00000555497 RBCK1Q9BYM8 510 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 WDR12Q9GZL7 423 aaKnown RBP22.6■■□□□ 1.21
TMEM260-207ENST00000555497 HHATLQ9HCP6 504 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 CA14Q9ULX7 337 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 CLCA2Q9UQC9 943 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 GPR52Q9Y2T5 361 aa22.6■■□□□ 1.21
TMEM260-207ENST00000555497 GXYLT2A0PJZ3 443 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 METTL15A6NJ78 407 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CHURC1-FNTBB4DL54 471 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CHST10O43529 356 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF12P17014 697 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 POU3F3P20264 500 aaPredicted RBP22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CDH3P22223 829 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 IFNGR2P38484 337 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 GPR4P46093 362 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 RAB38P57729 211 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 RPS3AP61247 264 aaKnown RBP22.59■■□□□ 1.21
TMEM260-207ENST00000555497 RHAGQ02094 409 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 SMAD4Q13485 552 aaKnown RBP22.59■■□□□ 1.21
TMEM260-207ENST00000555497 FIGNL1Q6PIW4 674 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 MCATQ8IVS2 390 aaKnown RBP22.59■■□□□ 1.21
TMEM260-207ENST00000555497 NRMQ8IXM6 262 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 ZNF619Q8N2I2 560 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CDRT4Q8N9R6 151 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 TEX47Q8TBZ9 253 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 S100ZQ8WXG8 99 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 SLC7A7Q9UM01 511 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 TMEM131Q92545 1883 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 UBXN7O94888 489 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 OR5F1O95221 314 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 GKN3PP0CG01 181 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 GAS1P54826 345 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 IFITM3Q01628 133 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CLEC12AQ5QGZ9 265 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 SLC27A4Q6P1M0 643 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 RRM2BQ7LG56 351 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 GALNT12Q8IXK2 581 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CENPSQ8N2Z9 138 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 COX18Q8N8Q8 333 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 OR52I1Q8NGK6 324 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 DUSP22Q9NRW4 184 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 FAIMQ9NVQ4 179 aa22.59■■□□□ 1.21
TMEM260-207ENST00000555497 TESQ9UGI8 421 aaKnown RBP22.59■■□□□ 1.21
TMEM260-207ENST00000555497 CCDC85CA6NKD9 419 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 CCRL2O00421 344 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 KLF4O43474 513 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 STX11O75558 287 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 HNRNPCP07910 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
TMEM260-207ENST00000555497 THBS1P07996 1170 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 HBQ1P09105 142 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 GNSP15586 552 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 SOX3P41225 446 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 ATP1A4Q13733 1029 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 ZAR1Q86SH2 424 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 NANOGP1Q8N7R0 232 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 GPR151Q8TDV0 419 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 DACH2Q96NX9 599 aa22.58■■□□□ 1.21
TMEM260-207ENST00000555497 A0A0A6YYC8 382 aaPredicted RBP22.58■■□□□ 1.2
TMEM260-207ENST00000555497 I3L1I5 382 aaPredicted RBP22.58■■□□□ 1.2
TMEM260-207ENST00000555497 CBX7O95931 251 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 MAOBP27338 520 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 HTR2AP28223 471 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 FZD5Q13467 585 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 TDGQ13569 410 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.58■■□□□ 1.2
TMEM260-207ENST00000555497 MRPL2Q5T653 305 aaKnown RBP22.58■■□□□ 1.2
TMEM260-207ENST00000555497 POGLUT1Q8NBL1 392 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 TMEM163Q8TC26 289 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 CHPT1Q8WUD6 406 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 ARSGQ96EG1 525 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 CDADC1Q9BWV3 514 aa22.58■■□□□ 1.2
TMEM260-207ENST00000555497 ANKHQ9HCJ1 492 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms