RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 GALTP07902 379 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 CD22P20273 847 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PPIBP23284 216 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 FLT3LGP49771 235 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 GANABQ14697 944 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 RGNQ15493 299 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TMUB2Q71RG4 321 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PRICKLE2Q7Z3G6 844 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 DCAF4L2Q8NA75 395 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ELP5Q8TE02 316 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 GEMIN6Q8WXD5 167 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 C11orf24Q96F05 449 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PAWRQ96IZ0 340 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF285Q96NJ3 590 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ABHD1Q96SE0 405 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 MTERF1Q99551 399 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SLC6A20Q9NP91 592 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 CFAP97Q9P2B7 532 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 KLHL42Q9P2K6 505 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 WRBO00258 174 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 GABRPO00591 440 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 C8GP07360 202 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SPP1P10451 314 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TYRP14679 529 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF157P51786 506 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SMAD3P84022 425 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TAP2Q03519 686 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TMEM88Q6PEY1 159 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ZFP41Q8N8Y5 198 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 BPIFCQ8NFQ6 507 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 NPDC1Q9NQX5 325 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SLC22A11Q9NSA0 550 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 VPS29Q9UBQ0 182 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 MANSC4A6NHS7 340 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 LRRC72A6NJI9 287 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 GALR3O60755 368 aaPredicted RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PRAF2O60831 178 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 XKP51811 444 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 RAP2BP61225 183 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 LGALS3BPQ08380 585 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ELAVL2Q12926 359 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 UBXN2BQ14CS0 331 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 GSG1LQ6UXU4 331 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 NAGSQ8N159 534 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 FAM26EQ8N5C1 309 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TMIEQ8NEW7 156 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 PXT1Q8NFP0 134 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SETD7Q8WTS6 366 aaKnown RBP14.7□□□□□ -0.06
SYNE3-203ENST00000554873 SLC22A12Q96S37 553 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 ARHGAP9Q9BRR9 750 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 DUSP26Q9BV47 211 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 TMED9Q9BVK6 235 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 MED11Q9P086 117 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 MGAT4CQ9UBM8 478 aa14.7□□□□□ -0.06
SYNE3-203ENST00000554873 H3BN98 237 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF821O75541 412 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 IGFBP1P08833 259 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 NPR2P20594 1047 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 PTAFRP25105 342 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 VIPR1P32241 457 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 GPR143P51810 404 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 PFN3P60673 137 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 STX4Q12846 297 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 HTR4Q13639 388 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 DDX39BQ13838 428 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 B3GLCTQ6Y288 498 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 Q6ZTK2 550 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SPICQ8N5J4 248 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 HJURPQ8NCD3 748 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 CRB3Q9BUF7 120 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 C20orf85Q9H1P6 137 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 TBC1D17Q9HA65 648 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 ENPP4Q9Y6X5 453 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 C1orf226A1L170 272 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 TLX2O43763 284 aaPredicted RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SH3BGRLO75368 114 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 IGHV2-70P01814 119 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF3P17036 446 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SEC61A1P61619 476 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 IRF8Q02556 426 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SLC8B1Q6J4K2 584 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 PCSK9Q8NBP7 692 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 RBM14Q96PK6 669 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SLC25A32Q9H2D1 315 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 ANKRD19PQ9H560 264 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 EXOSC3Q9NQT5 275 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 SEMA3GQ9NS98 782 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 MIOXQ9UGB7 285 aa14.69□□□□□ -0.06
SYNE3-203ENST00000554873 ZNF106Q9H2Y7 1883 aaKnown RBP14.69□□□□□ -0.06
SYNE3-203ENST00000554873 EFCAB7A8K855 629 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PRR23D1E9PI22 279 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 GFYI3L273 518 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PCDH7O60245 1069 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 FZD7O75084 574 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 SOCS5O75159 536 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PRR23D2P0DMB1 279 aaPredicted RBP14.68□□□□□ -0.06
SYNE3-203ENST00000554873 PTSQ03393 145 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 XKR6Q5GH73 641 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 SLC22A10Q63ZE4 541 aa14.68□□□□□ -0.06
SYNE3-203ENST00000554873 HBMQ6B0K9 141 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms