RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 EHD3Q9NZN3 535 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CCDC167Q9P0B6 97 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 TRPC4Q9UBN4 977 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 KLK13Q9UKR3 277 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CLDN16Q9Y5I7 305 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 CAPN7Q9Y6W3 813 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 APC2O95996 2303 aa5.87□□□□□ -1.47
SCFD1-212ENST00000554486 FRYQ5TBA9 3013 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ACACAQ13085 2346 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 A0A087WWL8 130 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 IGKV3D-11A0A0A0MRZ8 115 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 C1orf226A1L170 272 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 TRABD2BA6NFA1 517 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CCT8L1PA6NM43 557 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 NR5A2O00482 541 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FGF17O60258 216 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 B4GALT2O60909 372 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SCN2BO60939 215 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CDC123O75794 336 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SLPIP03973 132 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 KLK3P07288 261 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FHP07954 510 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 COX7A2P14406 83 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CAPN3P20807 821 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 EFNA1P20827 205 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 IL10P22301 178 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 RBMS1P29558 406 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 TLX1P31314 330 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 S100A3P33764 101 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 RPL3P39023 403 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FRKP42685 505 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 KCNJ5P48544 419 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 UCP3P55916 312 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CXADRP78310 365 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 BTG2P78543 158 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 RHAGQ02094 409 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ID2Q02363 134 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ACTN3Q08043 901 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FHL2Q14192 279 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 RCAN2Q14206 197 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FAM174BQ3ZCQ3 159 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CPTPQ5TA50 214 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MLIPQ5VWP3 458 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 OR52E8Q6IFG1 317 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FAM180BQ6P0A1 224 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 R3HCC1LQ7Z5L2 792 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SNX32Q86XE0 403 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 OR4N5Q8IXE1 308 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF595Q8IYB9 648 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 PRSS58Q8IYP2 241 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 OR8J2Q8NGG1 315 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 STT3BQ8TCJ2 826 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ADAMTS18Q8TE60 1221 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CT55Q8WUE5 264 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 TANKQ92844 425 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MR1Q95460 341 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CIDECQ96AQ7 238 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 VPS33AQ96AX1 596 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 EXOSC8Q96B26 276 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 PPCDCQ96CD2 204 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MTERF3Q96E29 417 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SPDL1Q96EA4 605 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CNRIP1Q96F85 164 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 OR1F2PQ96R84 312 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 TRIB1Q96RU8 372 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ZBTB18Q99592 522 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SCNM1Q9BWG6 230 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 VN1R1Q9GZP7 353 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SLC26A1Q9H2B4 701 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 RPF2Q9H7B2 306 aaKnown RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 WDR41Q9HAD4 459 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MIEF1Q9NQG6 463 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SLC35C2Q9NQQ7 365 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 NECTIN3Q9NQS3 549 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MRGBPQ9NV56 204 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 TMEM45AQ9NWC5 275 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SH3BP4Q9P0V3 963 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 IFT80Q9P2H3 777 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ZNF282Q9UDV7 671 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-212ENST00000554486 KCNE5Q9UJ90 142 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 UTS2RQ9UKP6 389 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 PADI1Q9ULC6 663 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 ERVK-11Q9UQG0 969 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 MMACHCQ9Y4U1 282 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 SPACA6W5XKT8 324 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 FREM2Q5SZK8 3169 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 NCOR2Q9Y618 2525 aa5.86□□□□□ -1.47
SCFD1-212ENST00000554486 CENPVL1A0A0U1RR11 272 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 LOC100653049A0A140TA62 436 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 LOC101059948A0A1B0GTJ6 334 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 MYO1GB0I1T2 1018 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 C9J4A7 227 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 STMND1H3BQB6 276 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 FBP2O00757 339 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CFLARO15519 480 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 RAD1O60671 282 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 CTNSO60931 367 aa5.85□□□□□ -1.47
SCFD1-212ENST00000554486 LDB3O75112 727 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms