RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 C17orf105B2RV13 164 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 INAFM1C9JVW0 142 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 E9PBE3 544 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 H7C1Q1 480 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 PDPK1O15530 556 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF354AO60765 605 aaPredicted RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 SLC22A3O75751 556 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 BCAS2O75934 225 aaPredicted RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 LRATO95237 230 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 IGKV3-11P04433 115 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 NT5EP21589 574 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 BMP5P22003 454 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 PCSK6P29122 969 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 FEN1P39748 380 aaKnown RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 NCBP2P52298 156 aaKnown RBP eCLIP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF136P52737 540 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ARFIP2P53365 341 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 GYS2P54840 703 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 LRRC74AQ0VAA2 488 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 FUT7Q11130 342 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 MAP4K2Q12851 820 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 SQLEQ14534 574 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 MLC1Q15049 377 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 MPEG1Q2M385 716 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF385BQ569K4 471 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 Q5PR19 223 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ANXA8L1Q5VT79 327 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 CGB2Q6NT52 195 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 HSDL2Q6YN16 418 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 MIER2Q8N344 545 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 VWA5B2Q8N398 1253 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 KRTCAP2Q8N6L1 136 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 VPS37AQ8NEZ2 397 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 TNIP2Q8NFZ5 429 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 OR7G1Q8NGA0 311 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 OR8J2Q8NGG1 315 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ZFP28Q8NHY6 868 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 NEIL3Q8TAT5 605 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 LINC01560Q8TB33 94 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 OR5P2Q8WZ92 322 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 GFM2Q969S9 779 aaKnown RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 EXOSC8Q96B26 276 aaKnown RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 CTHRC1Q96CG8 243 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 SENP5Q96HI0 755 aaPredicted RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 FBXL20Q96IG2 436 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 RILPQ96NA2 401 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 AMDHD1Q96NU7 426 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 DACH2Q96NX9 599 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 BBS4Q96RK4 519 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 ZBTB18Q99592 522 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 TMEM120AQ9BXJ8 343 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 RABEP2Q9H5N1 569 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 LDAHQ9H6V9 325 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 LIN28AQ9H9Z2 209 aaKnown RBP7.06□□□□□ -1.28
ABCD4-220ENST00000553998 SACM1LQ9NTJ5 587 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 SH3BP4Q9P0V3 963 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 COPS7AQ9UBW8 275 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 CFL2Q9Y281 166 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 EXPH5Q8NEV8 1989 aa7.06□□□□□ -1.28
ABCD4-220ENST00000553998 A0A087WV62 115 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 A0A1W2PRB8 838 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 A0A1W2PS29 197 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OR6C76A6NM76 312 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 G3V3Y1 287 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 WWP2O00308 870 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PLOD2O00469 737 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 RNASET2O00584 256 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PLOD3O60568 738 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 CRLF1O75462 422 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 IL18BPO95998 194 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 P04436 131 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 IL6P05231 212 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 RFPL3SP0C7P2 107 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 CCL3P10147 92 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 LAMP1P11279 417 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 DRD4P21917 467 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 DNASE1L1P49184 302 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 SEC24CP53992 1094 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 MANFP55145 182 aaKnown RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 UFM1P61960 85 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PPP2R2BQ00005 443 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 MGAT2Q10469 447 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF267Q14586 743 aaPredicted RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PRSS53Q2L4Q9 553 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PRICKLE4Q2TBC4 344 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF791Q3KP31 576 aaPredicted RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ACSF3Q4G176 576 aaPredicted RBP7.05□□□□□ -1.28
ABCD4-220ENST00000553998 ZNF628Q5EBL2 1059 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 PIGGQ5H8A4 983 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OPN5Q6U736 354 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 MSANTD1Q6ZTZ1 278 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 SPATA21Q7Z572 469 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 CPLX4Q7Z7G2 160 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 LACC1Q8IV20 430 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 P3H2Q8IVL5 708 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 CCDC116Q8IYX3 515 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OR7A2PQ8NGA2 310 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OR5L2Q8NGL0 311 aa7.05□□□□□ -1.28
ABCD4-220ENST00000553998 OR9A2Q8NGT5 310 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms