RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 EVA1AQ9H8M9 152 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 MTHFD2LQ9H903 347 aaPredicted RBP9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GPATCH2Q9NW75 528 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 CCDC167Q9P0B6 97 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 LUZP4Q9P127 313 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 PPP4R1LQ9P1A2 415 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 P2RX2Q9UBL9 471 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 NPIPA1Q9UND3 350 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF232Q9UNY5 417 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 DTX4Q9Y2E6 619 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 GMEB1Q9Y692 573 aa9.41□□□□□ -0.9
TRAFD1-208ENST00000552890 TRGV5A0A0B4J1U4 118 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 A0A1B0GVC2 190 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 AQP7O14520 342 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 NDUFB5O43674 189 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 UNC5CO95185 931 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 UTS2O95399 124 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 STSP08842 583 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 GDF1P27539 372 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SRD5A2P31213 254 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 PTGS2P35354 604 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SOX18P35713 384 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 EIF1P41567 113 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 ATP12AP54707 1039 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SUMO3P55854 103 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 NME5P56597 212 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 GPR85P60893 370 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 EEF1A1P68104 462 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 FOXO1Q12778 655 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 CYLC2Q14093 348 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 NNATQ16517 81 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 DUSP5Q16690 384 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 MMEL1Q495T6 779 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 FLYWCH1Q4VC44 716 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 C4orf17Q53FE4 359 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 EXOSC6Q5RKV6 272 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 DCST2Q5T1A1 773 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 EEF1A1P5Q5VTE0 462 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 NPSR1Q6W5P4 371 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 C16orf47Q6ZP98 133 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SPPL2CQ8IUH8 684 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SIAH3Q8IW03 269 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 DPP10Q8N608 796 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 DOK4Q8TEW6 326 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 CMTM5Q96DZ9 223 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 ZNF317Q96PQ6 595 aaPredicted RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 OR7D2Q96RA2 312 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 EBF4Q9BQW3 602 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SPATA5L1Q9BVQ7 753 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SPATA9Q9BWV2 254 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 TPT1P8Q9HAU6 139 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 RALYQ9UKM9 306 aaKnown RBP9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC5A6Q9Y289 635 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 SLC35A3Q9Y2D2 325 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 C15orf41Q9Y2V0 281 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 CAPN7Q9Y6W3 813 aa9.4□□□□□ -0.9
TRAFD1-208ENST00000552890 NUP214P35658 2090 aaPredicted RBP9.4□□□□□ -0.91
TRAFD1-208ENST00000552890 IGLV3-32A0A0A0MS00 114 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 C15orf38-AP3S2A0A0A6YYH1 394 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 C5orf58C9J3I9 102 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 GTPBP1O00178 669 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 NR5A2O00482 541 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 EIF4E2O60573 245 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 SLC19A2O60779 497 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 WDR1O75083 606 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 HPNP05981 417 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 NR2F1P10589 423 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ACP2P11117 423 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ESRRAP11474 423 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 CYP4B1P13584 511 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 CHMP24386 653 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 LSP1P33241 339 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ADH7P40394 386 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 RFX3P48380 749 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 DNASE1L1P49184 302 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ZNF41P51814 821 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 MNAT1P51948 309 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 MAP2K6P52564 334 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 SMSP52788 366 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 DGKQP52824 942 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 CRISP3P54108 245 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 TOMM20Q15388 145 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 BCL2A1Q16548 175 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 PRSS53Q2L4Q9 553 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 LRIF1Q5T3J3 769 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 RPTNQ6XPR3 784 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 Q6ZPB1 254 aaPredicted RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 LRRC74BQ6ZQY2 392 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 EIF3MQ7L2H7 374 aaKnown RBP9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 SPATA21Q7Z572 469 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ARPINQ7Z6K5 226 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 ANKRD46Q86W74 232 aa9.39□□□□□ -0.91
TRAFD1-208ENST00000552890 KRT73Q86Y46 540 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms