RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TOR2AQ5JU69 321 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 WDR45BQ5MNZ6 344 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 IDNKQ5T6J7 187 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ZBTB37Q5TC79 503 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 NDUFAF5Q5TEU4 345 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 BICRALQ6AI39 1079 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ANKRD54Q6NXT1 300 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF322Q6U7Q0 402 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 TMEM107Q6UX40 140 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GLRX5Q86SX6 157 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CCDC28AQ8IWP9 274 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 KRT78Q8N1N4 520 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SUN3Q8TAQ9 357 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SMG7Q92540 1137 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 AKAP1Q92667 903 aaKnown RBP eCLIP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 DIO2Q92813 273 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ABHD1Q96SE0 405 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SECISBP2Q96T21 854 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 MENTQ9BUN1 341 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SPATA5L1Q9BVQ7 753 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 HDHD2Q9H0R4 259 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 HEXA-AS1Q9H8Q6 139 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 HINT3Q9NQE9 182 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SPHK2Q9NRA0 654 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 IMP3Q9NV31 184 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 TEKT2Q9UIF3 430 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ADAM30Q9UKF2 790 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CBLCQ9ULV8 474 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ZFR2Q9UPR6 939 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 POLHQ9Y253 713 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SLC9A8Q9Y2E8 581 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 IGKV1-8A0A0C4DH67 115 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CIB4A0PJX0 185 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ANTXRLA6NF34 631 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 E9PI62 339 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 J3QRE1 110 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CCL16O15467 120 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 NDUFS4O43181 175 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CHST10O43529 356 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 MOSPD3O75425 235 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CXCL10P02778 98 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 C8orf89P0DMQ9 161 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 FUT1P19526 365 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 PPP2R1BP30154 601 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GPR1P46091 355 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 NCBP2P52298 156 aaKnown RBP eCLIP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 TAS2R41P59536 307 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 BTG1P62324 171 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ADAM15Q13444 863 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 MLC1Q15049 377 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ANGPT1Q15389 498 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 RASSF6Q6ZTQ3 369 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 KIAA0907Q7Z7F0 614 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 C17orf64Q86WR6 236 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 CCDC116Q8IYX3 515 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GPR135Q8IZ08 494 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 NRSN1Q8IZ57 195 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GNPDA2Q8TDQ7 276 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ACOT12Q8WYK0 555 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 OTULINQ96BN8 352 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF764Q96H86 408 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GPR137Q96N19 417 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF558Q96NG5 402 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SLC38A2Q96QD8 506 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 UBL7Q96S82 380 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 TBX5Q99593 518 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 DHRS9Q9BPW9 319 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 C17orf62Q9BQA9 187 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 HCAR1Q9BXC0 346 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ENKD1Q9H0I2 346 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SLC38A1Q9H2H9 487 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 GHITMQ9H3K2 345 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 NT5DC2Q9H857 520 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 MED20Q9H944 212 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 SYNPO2LQ9H987 977 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 BCL2L10Q9HD36 194 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ACSS1Q9NUB1 689 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ASB6Q9NWX5 421 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 B3GNT2Q9NY97 397 aa5.07□□□□□ -1.6
LIMA1-212ENST00000552491 MRPL39Q9NYK5 338 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 ELF5Q9UKW6 265 aaPredicted RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 EXOGQ9Y2C4 368 aaKnown RBP5.07□□□□□ -1.6
LIMA1-212ENST00000552491 A0A0A6YYD5 115 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 A0A0G2JK05 382 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 SHOXO15266 292 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 EEF1E1O43324 174 aaKnown RBP5.06□□□□□ -1.6
LIMA1-212ENST00000552491 KLF4O43474 513 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 RNF13O43567 381 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 OR1F1O43749 312 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 FCMRO60667 390 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ERAL1O75616 437 aaKnown RBP5.06□□□□□ -1.6
LIMA1-212ENST00000552491 SERPIND1P05546 499 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 C8AP07357 584 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ZGLP1P0C6A0 271 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 C6P13671 934 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 ZNF250P15622 560 aa5.06□□□□□ -1.6
LIMA1-212ENST00000552491 GALP22466 123 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms