RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 AHSA1O95433 338 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 UGT2B7P16662 529 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ZNF91Q05481 1191 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 SOWAHCQ53LP3 525 aaPredicted RBP14.09□□□□□ -0.15
CUX1-214ENST00000550008 TUBA3EQ6PEY2 450 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CCBE1Q6UXH8 406 aaPredicted RBP14.09□□□□□ -0.15
CUX1-214ENST00000550008 ZNF550Q7Z398 422 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CDRT4Q8N9R6 151 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 HCAR2Q8TDS4 363 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 NANSQ9NR45 359 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CTDSP2O14595 271 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 AREL1O15033 823 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 DNAJB5O75953 348 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CDK1P06493 297 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CD2P06729 351 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ITGAMP11215 1152 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 NKX2-5P52952 324 aaPredicted RBP14.09□□□□□ -0.15
CUX1-214ENST00000550008 ADPRHP54922 357 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 PLCXD2Q0VAA5 305 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ENTPD8Q5MY95 495 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 BICRALQ6AI39 1079 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 HDDC2Q7Z4H3 204 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 EPHX3Q9H6B9 360 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 A8MVJ9 347 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 CSNK1EP49674 416 aaKnown RBP14.09□□□□□ -0.15
CUX1-214ENST00000550008 ARFIP1P53367 373 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 HNRNPKP61978 463 aaKnown RBP eCLIP14.09□□□□□ -0.151e-6■■■■□ 24.1
CUX1-214ENST00000550008 MESP2Q0VG99 397 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ENTHD1Q8IYW4 607 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 PRODH2Q9UF12 536 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 HCN2Q9UL51 889 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ING4Q9UNL4 249 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 PCDHGA10Q9Y5H3 936 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 ASXL3Q9C0F0 2248 aa14.09□□□□□ -0.15
CUX1-214ENST00000550008 TRAV6A0A075B6T7 132 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 KCNJ13O60928 360 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 NKX3-2P78367 333 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 GAS6Q14393 721 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 PUS10Q3MIT2 529 aaKnown RBP14.08□□□□□ -0.15
CUX1-214ENST00000550008 OR5M10Q6IEU7 315 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 ABHD17CQ6PCB6 329 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 TMEM64Q6YI46 380 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 TMEM156Q8N614 296 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 NSMAFQ92636 917 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 OR5M11Q96RB7 305 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 METTL7AQ9H8H3 244 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 PRELID1Q9Y255 219 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 KIF13BQ9NQT8 1826 aa14.08□□□□□ -0.15
CUX1-214ENST00000550008 A0A0J9YY10 115 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 A0A1W2PRQ8 180 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PCP4L1A6NKN8 68 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 ORC5O43913 435 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PRR35P0CG20 571 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 CAV3P56539 151 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 SMAD2Q15796 467 aaKnown RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 ATCAYQ86WG3 371 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 AVL9Q8NBF6 648 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 NAXEQ8NCW5 288 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 SGTBQ96EQ0 304 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PRRC1Q96M27 445 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 DDX31Q9H8H2 851 aaKnown RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 MED20Q9H944 212 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 ACSS1Q9NUB1 689 aaPredicted RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 SCML1Q9UN30 329 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PRKNO60260 465 aaPredicted RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 MAP3K8P41279 467 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 RGS6P49758 472 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 NR0B1P51843 470 aaKnown RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 REEP5Q00765 189 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 DUSP6Q16828 381 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 DCST2Q5T1A1 773 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 BORAQ6PGQ7 559 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 NCCRP1Q6ZVX7 275 aaPredicted RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 MSRB3Q8IXL7 192 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 ADOQ96SZ5 270 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PRRG4Q9BZD6 226 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 B3GNT4Q9C0J1 378 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 TPRP12270 2363 aaKnown RBP14.08□□□□□ -0.16
CUX1-214ENST00000550008 CPMP14384 443 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 TPMTP51580 245 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 ISL1P61371 349 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 DNAJC22Q8N4W6 341 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 JAGN1Q8N5M9 183 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 SDR9C7Q8NEX9 313 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 OR13F1Q8NGS4 319 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 SUN5Q8TC36 379 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 TMEM239Q8WW34 195 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PINK1Q9BXM7 581 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 OR52A5Q9H2C5 316 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PLEKHA1Q9HB21 404 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 ENAMQ9NRM1 1142 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 PCM1Q15154 2024 aa14.08□□□□□ -0.16
CUX1-214ENST00000550008 LRIT2A6NDA9 550 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 RAD1O60671 282 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 SPARCP09486 303 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 KRT77Q7Z794 578 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 FBXL6Q8N531 539 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 LAMP5Q9UJQ1 280 aa14.07□□□□□ -0.16
CUX1-214ENST00000550008 A0A1W2PR48 441 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms