RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 RRAS2P62070 204 aaPredicted RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CDKN3Q16667 212 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TP53I3Q53FA7 332 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 HES5Q5TA89 166 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 NDUFAF5Q5TEU4 345 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ALKAL2Q6UX46 152 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 COMMD7Q86VX2 200 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ZNF655Q8N720 491 aaPredicted RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 OR4D9Q8NGE8 314 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TEFMQ96QE5 360 aaKnown RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 DPH7Q9BTV6 452 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 IFT27Q9BW83 186 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PLXND1Q9Y4D7 1925 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TEX13CA0A0J9YWL9 993 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 NDUFS4O43181 175 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CSN2P05814 226 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CBSLP0DN79 551 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CBSP35520 551 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 BLVRAP53004 296 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 RAB14P61106 215 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ATXN7L3Q14CW9 347 aaPredicted RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ARHGAP15Q53QZ3 475 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 FTMTQ8N4E7 242 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TOMM5Q8N4H5 51 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PLA2G15Q8NCC3 412 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PROKR2Q8NFJ6 384 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 OR9A2Q8NGT5 310 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 UBTD2Q8WUN7 234 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 BTN2A2Q8WVV5 523 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 FZD3Q9NPG1 666 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 RBFOX1Q9NWB1 397 aaKnown RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 REV1Q9UBZ9 1251 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 SATB2Q9UPW6 733 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TRBV5-4A0A0C4DH59 114 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CHST10O43529 356 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 OR7A10O76100 309 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ADAP00813 363 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 RLN1P04808 185 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CTSLP07711 333 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 FBXO45P0C2W1 286 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 LIPCP11150 499 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 HOXB9P17482 250 aaPredicted RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 DGCR2P98153 550 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM99Q8N816 258 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 OR9A1PQ8NGU1 263 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 KCTD12Q96CX2 325 aaKnown RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 CACNG6Q9BXT2 260 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 METTL17Q9H7H0 456 aaPredicted RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 NDUFB11Q9NX14 153 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 RPS27P42677 84 aaKnown RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 SLC1A3P43003 542 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 PNLIPRP1P54315 467 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 E2F1Q01094 437 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 LRRC37A5PQ49AS3 106 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 KLHL22Q53GT1 634 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 PLEKHS1Q5SXH7 462 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM215Q68D42 235 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 KIF18BQ86Y91 864 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 OR6K6Q8NGW6 343 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 HERVK_113Q902F9 699 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ZCCHC2Q9C0B9 1178 aaKnown RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 BHLHE41Q9C0J9 482 aaPredicted RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 FN3KQ9H479 309 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 SLA2Q9H6Q3 261 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 AUNIPQ9H7T9 357 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 C3orf14Q9HBI5 128 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ACOXLQ9NUZ1 547 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 SLC23A2Q9UGH3 650 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 WDFY3Q8IZQ1 3526 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 PRAMEF27A3QJZ7 478 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 LRRN3E7EW58 273 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 RGS13O14921 159 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 MPZL2O60487 215 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 FMO6PO60774 539 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 RECKO95980 971 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 UQCRC2P22695 453 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 DNASE1P24855 282 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 CENPAP49450 140 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 TSPAN5P62079 268 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 MLLT11Q13015 90 aaPredicted RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 C11orf88Q6PI97 169 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 LIPIQ6XZB0 460 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 LSM14AQ8ND56 463 aaKnown RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 RFT1Q96AA3 541 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 ENKD1Q9H0I2 346 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 LRRN3Q9H3W5 708 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM5Q9Y2B1 443 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 SIRT4Q9Y6E7 314 aaPredicted RBP13.74□□□□□ -0.21
HOXC11-202ENST00000546378 HEATR5BQ9P2D3 2071 aa13.74□□□□□ -0.21
HOXC11-202ENST00000546378 CDC123O75794 336 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms