RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TRPC1P48995 793 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 CLNS1AP54105 237 aaKnown RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 HBA1P69905 142 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 CRYZQ08257 329 aaKnown RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 LASP1Q14847 261 aaKnown RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 PGS1Q32NB8 556 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 VASNQ6EMK4 673 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 RTL6Q6ICC9 239 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 OR4F3Q6IEY1 312 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 CDC73Q6P1J9 531 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 BHLHB9Q6PI77 547 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 NCCRP1Q6ZVX7 275 aaPredicted RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 ACAD11Q709F0 780 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 MAVSQ7Z434 540 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 GOLGA6L1Q8N7Z2 621 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 FADS6Q8N9I5 356 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 OR5M9Q8NGP3 310 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 ACTRT2Q8TDY3 377 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 SLC9A6Q92581 669 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 RMND5BQ96G75 393 aaPredicted RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 C16orf58Q96GQ5 468 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 ACTRT3Q9BYD9 372 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 PRDM14Q9GZV8 571 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 PIGUQ9H490 435 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 WDR55Q9H6Y2 383 aaPredicted RBP10.81□□□□□ -0.68
YBX3-217ENST00000546164 HHATLQ9HCP6 504 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 SDHAF3Q9NRP4 125 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 GPATCH2Q9NW75 528 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 TNFRSF10DQ9UBN6 386 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 FAM215AQ9Y5M1 114 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 SNX8Q9Y5X2 465 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 GPR45Q9Y5Y3 372 aa10.81□□□□□ -0.68
YBX3-217ENST00000546164 ITPR2Q14571 2701 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 IGLV3-32A0A0A0MS00 114 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 C15orf38-AP3S2A0A0A6YYH1 394 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 PRSS51A0A1B0GVH4 220 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 B4DXG7 233 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 ALG1L2C9J202 215 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 E9PBE3 544 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 KCNK2O95069 426 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 UTS2O95399 124 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 CLDN14O95500 239 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 ACTL6AO96019 429 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 KITP10721 976 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 CLK3P49761 638 aaKnown RBP10.8□□□□□ -0.68
YBX3-217ENST00000546164 PHC1P78364 1004 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 ZNF630Q2M218 657 aaPredicted RBP10.8□□□□□ -0.68
YBX3-217ENST00000546164 SPDYE7PQ495Y7 208 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 EIPR1Q53HC9 387 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 C1orf185Q5T7R7 199 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 ANXA8L1Q5VT79 327 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 ZNF585AQ6P3V2 769 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 B3GNT6Q6ZMB0 384 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 YRDCQ86U90 279 aaKnown RBP10.8□□□□□ -0.68
YBX3-217ENST00000546164 ULK2Q8IYT8 1036 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 CLECL1Q8IZS7 167 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 RPRMLQ8N4K4 120 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 COX18Q8N8Q8 333 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 VPS37AQ8NEZ2 397 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 FBXO30Q8TB52 745 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 LRRC8CQ8TDW0 803 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 TIMP4Q99727 224 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 BTBD2Q9BX70 525 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 UGT2B28Q9BY64 529 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 COQ3Q9NZJ6 369 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 FLRT3Q9NZU0 649 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 FBXL2Q9UKC9 423 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
YBX3-217ENST00000546164 NUP214P35658 2090 aaPredicted RBP10.8□□□□□ -0.68
YBX3-217ENST00000546164 AHRRA9YTQ3 701 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 CFLARO15519 480 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 SCO2O43819 266 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 SASH3O75995 380 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GLI4P10075 376 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 IDO1P14902 403 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 BMP7P18075 431 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 TBXA2RP21731 343 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GCKP35557 465 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GFRA1P56159 465 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 DSCR4P56555 118 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 NUP107P57740 925 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 UFM1P61960 85 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 PPP2R2AP63151 447 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 POU6F2P78424 691 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 TP53BP2Q13625 1128 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GANABQ14697 944 aaKnown RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 TOMM20Q15388 145 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GRAMD1BQ3KR37 738 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 FAM174BQ3ZCQ3 159 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 PDCD4Q53EL6 469 aaKnown RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 SPANXN4Q5MJ08 99 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 WIPI1Q5MNZ9 446 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 OR5M10Q6IEU7 315 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 PM20D2Q8IYS1 436 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GLB1L3Q8NCI6 653 aaPredicted RBP10.79□□□□□ -0.68
YBX3-217ENST00000546164 OR4K17Q8NGC6 315 aa10.79□□□□□ -0.68
YBX3-217ENST00000546164 GOT1L1Q8NHS2 421 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms