RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 PADI1Q9ULC6 663 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TEX264Q9Y6I9 313 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CDRT15L2A8MXV6 281 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 H7C4K7 107 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 XPNPEP2O43895 674 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 UPK1BO75841 260 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CFIP05156 583 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MELTFP08582 738 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 OR2T7P0C7T2 308 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CD82P27701 267 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GPR143P51810 404 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 DUSP8Q13202 625 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF628Q5EBL2 1059 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CDHR3Q6ZTQ4 885 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MIER2Q8N344 545 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 RAB3CQ96E17 227 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 FBXL20Q96IG2 436 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 Q96MT0 163 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PLK3Q9H4B4 646 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MTHFD2LQ9H903 347 aaPredicted RBP8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MIEF1Q9NQG6 463 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PDGFCQ9NRA1 345 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PNPOQ9NVS9 261 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PACSIN3Q9UKS6 424 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PRPF19Q9UMS4 504 aaKnown RBP8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ADAMTS5Q9UNA0 930 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 M0QZ24 198 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 QSOX1O00391 747 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PIK3R2O00459 728 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 DLGAP1O14490 977 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MBTPS2O43462 519 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GALR2O43603 387 aaPredicted RBP8.38□□□□□ -1.07
VPS13D-212ENST00000543766 FGBP02675 491 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CRYGCP07315 174 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ALPIP09923 528 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 SPI1P17947 270 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TBXA2RP21731 343 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ADCYAP1R1P41586 468 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 SOX8P57073 446 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CHRFAM7AQ494W8 412 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 PIGGQ5H8A4 983 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TEX261Q6UWH6 196 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TMEM144Q7Z5S9 345 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 RTN4RL2Q86UN3 420 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 CBLN2Q8IUK8 224 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 C10orf107Q8IVU9 208 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TNS4Q8IZW8 715 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 OR4C5Q8NGB2 326 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MCFD2Q8NI22 146 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 TNFAIP8L1Q8WVP5 186 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GDF15Q99988 308 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 APOL4Q9BPW4 351 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 RAB11FIP5Q9BXF6 653 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 MAGEB5Q9BZ81 275 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 ADARB2Q9NS39 739 aaKnown RBP8.38□□□□□ -1.07
VPS13D-212ENST00000543766 GPR173Q9NS66 373 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 U3KQ87 197 aa8.38□□□□□ -1.07
VPS13D-212ENST00000543766 M0QXV9 152 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ACOT8O14734 319 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SLC37A4O43826 429 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MMP20O60882 483 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 AQP8O94778 261 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 CEACAM5P06731 702 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RPS19P39019 145 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MFAP4P55083 255 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 PLAURQ03405 335 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 TNK2Q07912 1038 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 FASTKQ14296 549 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SLC35D3Q5M8T2 416 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ELP2Q6IA86 826 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ENTHD1Q8IYW4 607 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 JAGN1Q8N5M9 183 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 C11orf42Q8N5U0 333 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 FAM71CQ8NEG0 241 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 OR4K14Q8NGD5 310 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RHEBL1Q8TAI7 183 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 RAB2BQ8WUD1 216 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ARRDC3Q96B67 414 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 SAT2Q96F10 170 aaPredicted RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 TGM7Q96PF1 710 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 KCNK16Q96T55 309 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 FICDQ9BVA6 458 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ADAMTS10Q9H324 1103 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ASAH2Q9NR71 780 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 USP36Q9P275 1121 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 UBQLN1Q9UMX0 589 aaKnown RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ST3GAL5Q9UNP4 418 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 C9orf170A2RU37 121 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ZNF705GA8MUZ8 300 aaPredicted RBP8.37□□□□□ -1.07
VPS13D-212ENST00000543766 HS3ST1O14792 307 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 ARPC3O15145 178 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 GDF9O60383 454 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 UTS2O95399 124 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 GZMKP49863 264 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 TMBIM6P55061 237 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 TPI1P60174 286 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 IL18Q14116 193 aa8.37□□□□□ -1.07
VPS13D-212ENST00000543766 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms