RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 LRRC8CQ8TDW0 803 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 DUSP19Q8WTR2 217 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 CDS1Q92903 461 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 RNF166Q96A37 237 aaPredicted RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 TIMP4Q99727 224 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 VKORC1Q9BQB6 163 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 INPP5KQ9BT40 448 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PIGUQ9H490 435 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 SLC6A13Q9NSD5 602 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 QPCTLQ9NXS2 382 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 MED11Q9P086 117 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 PLEKHB1Q9UF11 243 aaPredicted RBP8.86□□□□□ -0.99
YBX3-212ENST00000542002 FAM215AQ9Y5M1 114 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 WIF1Q9Y5W5 379 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 ZGRF1Q86YA3 2104 aa8.86□□□□□ -0.99
YBX3-212ENST00000542002 HIVEP3Q5T1R4 2406 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 TTC36A6NLP5 189 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 E9PBE3 544 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 UBDO15205 165 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 SCO2O43819 266 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 SLC22A3O75751 556 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 CBR3O75828 277 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 KCNH1O95259 989 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ALOX5P09917 674 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ESRRAP11474 423 aaPredicted RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 DDX5P17844 614 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 BMP7P18075 431 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ELAVL4P26378 380 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 S100A3P33764 101 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 KRT20P35900 424 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 RNF144AP50876 292 aaPredicted RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 AQP5P55064 265 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 B3GALT5-AS1P59052 145 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 PRR5P85299 388 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 CRYZQ08257 329 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 PMPCAQ10713 525 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 TOMM20Q15388 145 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.85□□□□□ -0.99
YBX3-212ENST00000542002 SPDYE7PQ495Y7 208 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 VPS26BQ4G0F5 336 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 PDCD4Q53EL6 469 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 VASNQ6EMK4 673 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 CDC73Q6P1J9 531 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ZNF585AQ6P3V2 769 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 SEM1Q6ZVN7 128 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 MRGPRGQ86SM5 289 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 FADS6Q8N9I5 356 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 OR2M3Q8NG83 312 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 OR4A15Q8NGL6 344 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 OR9I1Q8NGQ6 314 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 GOT1L1Q8NHS2 421 aaPredicted RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 JADE3Q92613 823 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ZNF524Q96C55 264 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 THOC1Q96FV9 657 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 MAGEB18Q96M61 343 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 CCDC115Q96NT0 180 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 STACQ99469 402 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 BTBD2Q9BX70 525 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 DSN1Q9H410 356 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 SDR39U1Q9NRG7 319 aaPredicted RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 DUSP22Q9NRW4 184 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 FAM120CQ9NX05 1096 aaKnown RBP8.85□□□□□ -0.99
YBX3-212ENST00000542002 GIN1Q9NXP7 522 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 ACAD8Q9UKU7 415 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 NCKAP5O14513 1909 aa8.85□□□□□ -0.99
YBX3-212ENST00000542002 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
YBX3-212ENST00000542002 NINQ8N4C6 2090 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 C15orf38-AP3S2A0A0A6YYH1 394 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 NPIPA5A0A0B4J1W7 369 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 PRAMEF27A3QJZ7 478 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 NPIPA7E9PJI5 369 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 BCKDKO14874 412 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 FCMRO60667 390 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 TGDSO95455 350 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 OXSR1O95747 527 aaPredicted RBP8.84□□□□□ -0.99
YBX3-212ENST00000542002 GSNP06396 782 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 PGRP06401 933 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 NPIPA8P0DM63 369 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 GLI4P10075 376 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 GP1BBP13224 206 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 IDO1P14902 403 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 TBXA2RP21731 343 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 MATN1P21941 496 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
YBX3-212ENST00000542002 PRIM2P49643 509 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 STARP49675 285 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 CLNS1AP54105 237 aaKnown RBP8.84□□□□□ -0.99
YBX3-212ENST00000542002 CASP6P55212 293 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 GFRA1P56159 465 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 NUP107P57740 925 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 STX5Q13190 355 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 NHSL2Q5HYW2 709 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.84□□□□□ -0.99
YBX3-212ENST00000542002 ANXA8L1Q5VT79 327 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 FUNDC1Q8IVP5 155 aa8.84□□□□□ -0.99
YBX3-212ENST00000542002 COX18Q8N8Q8 333 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms