RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 KRT20P35900 424 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 KCNJ5P48544 419 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 NR1H2P55055 460 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 TMEM44Q2T9K0 475 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 PRSS57Q6UWY2 283 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 GPRIN3Q6ZVF9 776 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 GALNT10Q86SR1 603 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 RELL1Q8IUW5 271 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 MEIOBQ8N635 442 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 DUSP19Q8WTR2 217 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 KLHL4Q9C0H6 718 aa13.88□□□□□ -0.19
CLSTN3-213ENST00000541953 RTTNQ86VV8 2226 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 UPK1AO00322 258 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 UBFD1O14562 309 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 TNFRSF21O75509 655 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 BCAS2O75934 225 aaPredicted RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 CNOT4O95628 575 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 KRT6AP02538 564 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 OPN1LWP04000 364 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 KRT6BP04259 564 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 HSD3B1P14060 373 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 FPR1P21462 350 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 HSD3B2P26439 372 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 RFX3P48380 749 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 KRT6CP48668 564 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 EEF1A1P68104 462 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 ACSM2AQ08AH3 577 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 RASA2Q15283 850 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 LGSNQ5TDP6 509 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 EEF1A1P5Q5VTE0 462 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 ACSM2BQ68CK6 577 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 GALNT18Q6P9A2 607 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 C20orf204Q6ZNR8 217 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 CHMP1BQ7LBR1 199 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 METTL25Q8N6Q8 603 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 MAPK1IP1LQ8NDC0 245 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 METTL6Q8TCB7 284 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 BBS4Q96RK4 519 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 GSX2Q9BZM3 304 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 GLIPR2Q9H4G4 154 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 ELOVL5Q9NYP7 299 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 TAS2R9Q9NYW1 312 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 SENP1Q9P0U3 644 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 PROCRQ9UNN8 238 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 ZNF175Q9Y473 711 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 STAB1Q9NY15 2570 aa13.87□□□□□ -0.19
CLSTN3-213ENST00000541953 CR1P17927 2039 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 FAM171A2A8MVW0 826 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ULK1O75385 1050 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 IL33O95760 270 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ANXA4P09525 319 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 DDCP20711 480 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 TBXA2RP21731 343 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 HMOX2P30519 316 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 SERPINB9P50453 376 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 NCBP2P52298 156 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ZNF844Q08AG5 666 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 CTU2Q2VPK5 515 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 GRAMD1BQ3KR37 738 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 SPIN4Q56A73 249 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 FAM71E1Q6IPT2 247 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 PPP4R4Q6NUP7 873 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 STAC2Q6ZMT1 411 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 FAM214BQ7L5A3 538 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ZAR1Q86SH2 424 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 EXOC3L1Q86VI1 746 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 PIK3R3Q92569 461 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 SLC9A6Q92581 669 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ADGRG7Q96K78 797 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 BDH2Q9BUT1 245 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 GSTO2Q9H4Y5 243 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 NMRK1Q9NWW6 199 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 FAM120CQ9NX05 1096 aaKnown RBP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 ABCG2Q9UNQ0 655 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 C19orf53Q9UNZ5 99 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 POLR3HQ9Y535 204 aaPredicted RBP13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 SVEP1Q4LDE5 3571 aa13.86□□□□□ -0.19
CLSTN3-213ENST00000541953 A0A087WV62 115 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 IGLV3-32A0A0A0MS00 114 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 HEPACAMQ14CZ8 416 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 ZNF704Q6ZNC4 412 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 ATG4DQ86TL0 474 aaPredicted RBP13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 OR2L13Q8N349 312 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 AMDHD1Q96NU7 426 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 SLC39A3Q9BRY0 314 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 GIMAP4Q9NUV9 329 aa13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLSTN3-213ENST00000541953 GOLGA8RI6L899 631 aa13.84□□□□□ -0.19
CLSTN3-213ENST00000541953 EIF1AYO14602 144 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-213ENST00000541953 COQ9O75208 318 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms