RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PPP1R36Q96LQ0 422 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 PELOQ9BRX2 385 aaKnown RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 CNPPD1Q9BV87 410 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SAP130Q9H0E3 1048 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 AKTIPQ9H8T0 292 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MYNNQ9NPC7 610 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 SLC35C2Q9NQQ7 365 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 THAP1Q9NVV9 213 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 NKIRAS1Q9NYS0 192 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MAT2BQ9NZL9 334 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 MYOTQ9UBF9 498 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 NDRG3Q9UGV2 375 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 PSME2Q9UL46 239 aa8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 WBP11Q9Y2W2 641 aaKnown RBP8.07□□□□□ -1.12
TRAPPC1-202ENST00000540486 FAM166BA8MTA8 275 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 MYO1GB0I1T2 1018 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 HMGB1P1B2RPK0 211 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 WWP2O00308 870 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 KLF11O14901 512 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 HCN1O60741 890 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 OR2J2O76002 312 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 GLSO94925 669 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SNUPNO95149 360 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 EPPINO95925 133 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ATP1B1P05026 303 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 BMP4P12644 408 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 BCKDHAP12694 445 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 COX7A2P14406 83 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 CD33P20138 364 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 NT5EP21589 574 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 RPL38P63173 70 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 OCRLQ01968 901 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 DUSP8Q13202 625 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SLC10A1Q14973 349 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 PDCD2Q16342 344 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF385BQ569K4 471 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 PIGGQ5H8A4 983 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 IL23RQ5VWK5 629 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ANKRD26P1Q6NSI1 321 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 HSDL2Q6YN16 418 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SEM1Q6ZVN7 128 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 WDR75Q8IWA0 830 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 GALNT12Q8IXK2 581 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 FAM109AQ8N4B1 249 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 NAXEQ8NCW5 288 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 MAPK1IP1LQ8NDC0 245 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 PSD4Q8NDX1 1056 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TNIP2Q8NFZ5 429 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 OR2M7Q8NG81 312 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 CLHC1Q8NHS4 586 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SGMS2Q8NHU3 365 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 GFM2Q969S9 779 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ADIPOR1Q96A54 375 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 KLHL29Q96CT2 875 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TUBGCP3Q96CW5 907 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 PPP3R2Q96LZ3 170 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TSSK3Q96PN8 268 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 CCT7Q99832 543 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 BEX2Q9BXY8 128 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TTTY12Q9BZ98 90 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 NUF2Q9BZD4 464 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 OR10A5Q9H207 317 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 LDAHQ9H6V9 325 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ANKRA2Q9H9E1 313 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 UBTD1Q9HAC8 227 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 DEPPQ9NTK1 212 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF701Q9NV72 531 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TMEM160Q9NX00 188 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 EHD3Q9NZN3 535 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 JKAMPQ9P055 326 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 LPAR3Q9UBY5 353 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 YARS2Q9Y2Z4 477 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 TMED5Q9Y3A6 229 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 LIPGQ9Y5X9 500 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF780BQ9Y6R6 833 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 USF3Q68DE3 2245 aa8.06□□□□□ -1.12
TRAPPC1-202ENST00000540486 SVEP1Q4LDE5 3571 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 UQCRHLA0A096LP55 91 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 AHRRA9YTQ3 701 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 ZNF195O14628 629 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 AKAP10O43572 662 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 TBX19O60806 448 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 NME6O75414 186 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 LRATO95237 230 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 CBX7O95931 251 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 IL18BPO95998 194 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 ARAFP10398 606 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 KITP10721 976 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 G6PDP11413 515 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 PCSK2P16519 638 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 OPRM1P35372 400 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 MRPS35P82673 323 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 EMX2Q04743 252 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 PDE7AQ13946 482 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 EXOSC7Q15024 291 aaKnown RBP8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 ETFDHQ16134 617 aa8.05□□□□□ -1.12
TRAPPC1-202ENST00000540486 ATP6AP1LQ52LC2 224 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms