RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MPC1LP0DKB6 136 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 ARRB2P32121 409 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 ADH7P40394 386 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 SNRPEP62304 92 aaKnown RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 CAMK2GQ13555 558 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 GINS1Q14691 196 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 LRRC26Q2I0M4 334 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 TEX30Q5JUR7 227 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 CEP68Q76N32 757 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 OR2AP1Q8NGE2 309 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 OR10K1Q8NGX5 313 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 GPR152Q8TDT2 470 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 ELP5Q8TE02 316 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 ELP4Q96EB1 424 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 C14orf79Q96F83 325 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 MEGF10Q96KG7 1140 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 CLCC1Q96S66 551 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 P2RY12Q9H244 342 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 C11orf49Q9H6J7 331 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 GPR83Q9NYM4 423 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 MARCH4Q9P2E8 410 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 FBXL2Q9UKC9 423 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 HS3ST2Q9Y278 367 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 POMT1Q9Y6A1 747 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 A0A0D9SEW6 157 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 TLR4O00206 839 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 FMO6PO60774 539 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 SDC3O75056 442 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 AKR7A3O95154 331 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 CKMP06732 381 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 C8GP07360 202 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 NSG1P42857 185 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 GNG10P50151 68 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 EPHA5P54756 1037 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 SORDQ00796 357 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 SNTB2Q13425 540 aaKnown RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 FCN2Q15485 313 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 C6orf132Q5T0Z8 1188 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 CPTPQ5TA50 214 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 KANSL1Q7Z3B3 1105 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF248Q8NDW4 579 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 MAPK15Q8TD08 544 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 SMARCD2Q92925 531 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 BSCL2Q96G97 398 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 TSSK3Q96PN8 268 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 LGR4Q9BXB1 951 aa5.73□□□□□ -1.49
PTPRD-214ENST00000540109 LYRM2Q9NU23 88 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-214ENST00000540109 BTBD17A6NE02 478 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 UNC119BA6NIH7 251 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 P2RX6O15547 441 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 UBXN7O94888 489 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CSF1P09603 554 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ALDH3B1P43353 468 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 DGKGP49619 791 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 VEGFBP49765 207 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GATMP50440 423 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 E2F1Q01094 437 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PSRC1Q6PGN9 363 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SLC36A4Q6YBV0 504 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ADGRG3Q86Y34 549 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MRPL41Q8IXM3 137 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ACVR1CQ8NER5 493 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR52H1Q8NGJ2 320 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR13C4Q8NGS5 318 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OR8S1Q8NH09 359 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PHOSPHO2Q8TCD6 241 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CASTOR1Q8WTX7 329 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 AKTIPQ9H8T0 292 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 IL23AQ9NPF7 189 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SDR39U1Q9NRG7 319 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF275Q9NSD4 429 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 DNAJC27Q9NZQ0 273 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 OARD1Q9Y530 152 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RBM7Q9Y580 266 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 MEGF11A6BM72 1044 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ARGFXA6NJG6 315 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SLC16A6O15403 523 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 PRICKLE3O43900 615 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ECI2O75521 394 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RCBTB2O95199 551 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 IRF1P10914 325 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TAGLN2P37802 199 aaKnown RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 VLDLRP98155 873 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF616Q08AN1 781 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GTF2H2Q13888 395 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 BEX5Q5H9J7 111 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RAET1GQ6H3X3 334 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 RTL6Q6ICC9 239 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GTF2H2CQ6P1K8 395 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 ZNF704Q6ZNC4 412 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 TPRG1Q6ZUI0 275 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 LRRC70Q7Z2Q7 622 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 HSD17B13Q7Z5P4 300 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 LRRC28Q86X40 367 aaPredicted RBP5.72□□□□□ -1.49
PTPRD-214ENST00000540109 LURAP1LQ8IV03 231 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CFAP52Q8N1V2 620 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 SHKBP1Q8TBC3 707 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 CMTM3Q96MX0 182 aa5.72□□□□□ -1.49
PTPRD-214ENST00000540109 GPR21Q99679 349 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms