RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 NCBP2P52298 156 aaKnown RBP eCLIP13.59□□□□□ -0.23
USB1-203ENST00000539737 EMX2Q04743 252 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 DUSP2Q05923 314 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 PDE7AQ13946 482 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 TOMM20Q15388 145 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ZNF628Q5EBL2 1059 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 YRDCQ86U90 279 aaKnown RBP13.59□□□□□ -0.23
USB1-203ENST00000539737 OR9A2Q8NGT5 310 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 CLHC1Q8NHS4 586 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ZNF75CPQ92670 426 aaPredicted RBP13.59□□□□□ -0.23
USB1-203ENST00000539737 DIO2Q92813 273 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 RILPQ96NA2 401 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 UGT2B28Q9BY64 529 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 NUF2Q9BZD4 464 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 OR10A5Q9H207 317 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ACKR4Q9NPB9 350 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 INTS9Q9NV88 658 aaKnown RBP13.59□□□□□ -0.23
USB1-203ENST00000539737 QPCTLQ9NXS2 382 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 ADAM21Q9UKJ8 722 aa13.59□□□□□ -0.23
USB1-203ENST00000539737 MED12LQ86YW9 2145 aa13.58□□□□□ -0.23
USB1-203ENST00000539737 ROS1P08922 2347 aa13.58□□□□□ -0.23
USB1-203ENST00000539737 MYO1GB0I1T2 1018 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 INAFM1C9JVW0 142 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 PDPK1O15530 556 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 AKAP10O43572 662 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 TCEA1P23193 301 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 MASP1P48740 699 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 MGAT2Q10469 447 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 RPS6KA2Q15349 733 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.244e-17■■■■■ 82.4
USB1-203ENST00000539737 LTB4RQ15722 352 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 NNATQ16517 81 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 NTRK2Q16620 822 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 IL23RQ5VWK5 629 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 LACC1Q8IV20 430 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 CCDC116Q8IYX3 515 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 GCNT2Q8N0V5 402 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 ZNF615Q8N8J6 731 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 C17orf47Q8NEP4 570 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 ADCY4Q8NFM4 1077 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 GFM2Q969S9 779 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 CTHRC1Q96CG8 243 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 WDYHV1Q96HA8 205 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 PPP1R36Q96LQ0 422 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 Q96MF0 132 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 C7orf26Q96N11 449 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 SECISBP2Q96T21 854 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 GALNT8Q9NY28 637 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 MARCOQ9UEW3 520 aaPredicted RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 PRODH2Q9UF12 536 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 BCAP29Q9UHQ4 241 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 BAIAP2L1Q9UHR4 511 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 ZNF639Q9UID6 485 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 MAPRE3Q9UPY8 281 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 EXO1Q9UQ84 846 aaKnown RBP13.58□□□□□ -0.24
USB1-203ENST00000539737 NPFFR2Q9Y5X5 522 aa13.58□□□□□ -0.24
USB1-203ENST00000539737 HIVEP2P31629 2446 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 COQ9O75208 318 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 SNX4O95219 450 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 CBX7O95931 251 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 IL2RAP01589 272 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 IFI6P09912 130 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 NID1P14543 1247 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 PCSK2P16519 638 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 LBPP18428 481 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 PRPS1L1P21108 318 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 S1PR1P21453 382 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 GCKP35557 465 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 CDK9P50750 372 aaKnown RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 MRPS35P82673 323 aaKnown RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 SRYQ05066 204 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 PTGR1Q14914 329 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 NSUN5P2Q63ZY6 315 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 OGFOD2Q6N063 350 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 FAM111BQ6SJ93 734 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 ZNF441Q8N8Z8 693 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 OR52R1Q8NGF1 315 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 PIWIL2Q8TC59 973 aaKnown RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 DTNBP1Q96EV8 351 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 ZBED6CLQ96FA7 236 aaPredicted RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 AMDHD1Q96NU7 426 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 PRPF18Q99633 342 aaKnown RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
USB1-203ENST00000539737 PRDM14Q9GZV8 571 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 UBQLN3Q9H347 655 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 MED4Q9NPJ6 270 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 ATAD3AQ9NVI7 634 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 SH3BP4Q9P0V3 963 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
USB1-203ENST00000539737 CUBNO60494 3623 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms