RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 HCRTR2O43614 444 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 RCBTB2O95199 551 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 LINC00032P0C843 101 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 HK1P19367 917 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 CLK3P49761 638 aaKnown RBP20.1■□□□□ 0.81
SCARB1-206ENST00000539320 IFFO1Q0D2I5 559 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 PDE7AQ13946 482 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 RAET1LQ5VY80 246 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 PLXDC2Q6UX71 529 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 DDIASQ8IXT1 998 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 GCNT2Q8N0V5 402 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 INTS12Q96CB8 462 aaKnown RBP20.1■□□□□ 0.81
SCARB1-206ENST00000539320 MECRQ9BV79 373 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 RASSF1Q9NS23 344 aa20.1■□□□□ 0.81
SCARB1-206ENST00000539320 GXYLT2A0PJZ3 443 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 FAM221AA4D161 298 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 TUBAL3A6NHL2 446 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 KCNH1O95259 989 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 PRPS2P11908 318 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 CD1EP15812 388 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 GABRA3P34903 492 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 ASMTP46597 345 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 ART1P52961 327 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 BCL2A1Q16548 175 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 GALNTL6Q49A17 601 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 RFTN2Q52LD8 501 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-206ENST00000539320 SZRD1Q7Z422 152 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 RMND5BQ96G75 393 aaPredicted RBP20.09■□□□□ 0.81
SCARB1-206ENST00000539320 MS4A4EQ96PG1 132 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 RTN4RQ9BZR6 473 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 PTGES2Q9H7Z7 377 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 EML4Q9HC35 981 aaKnown RBP20.09■□□□□ 0.81
SCARB1-206ENST00000539320 MED11Q9P086 117 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 SH3BP4Q9P0V3 963 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 SLC17A7Q9P2U7 560 aa20.09■□□□□ 0.81
SCARB1-206ENST00000539320 PIP5K1BO14986 540 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 SPAG7O75391 227 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 UTS2O95399 124 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 FGF4P08620 206 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 PEPDP12955 493 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 FRKP42685 505 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 CPA2P48052 419 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 MANFP55145 182 aaKnown RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 VPS26BQ4G0F5 336 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 ARL13AQ5H913 290 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 MARCH3Q86UD3 253 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 MEIOBQ8N635 442 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 CEP70Q8NHQ1 597 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 PIK3R3Q92569 461 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 HOXB13Q92826 284 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 NINJ1Q92982 152 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 RBM24Q9BX46 236 aaKnown RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 TBL1XR1Q9BZK7 514 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 ACSS1Q9NUB1 689 aaPredicted RBP20.08■□□□□ 0.81
SCARB1-206ENST00000539320 BAIAP2L1Q9UHR4 511 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 TRAF6Q9Y4K3 522 aa20.08■□□□□ 0.81
SCARB1-206ENST00000539320 NKX2-2O95096 273 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 IGKV1D-16P01601 117 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 DDX5P17844 614 aaKnown RBP20.07■□□□□ 0.8
SCARB1-206ENST00000539320 HPCAL1P37235 193 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 GRAMD1BQ3KR37 738 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 ZCCHC23Q6ZST2 131 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 CHMP1BQ7LBR1 199 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 P4HA3Q7Z4N8 544 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 R3HCC1LQ7Z5L2 792 aaKnown RBP20.07■□□□□ 0.8
SCARB1-206ENST00000539320 UBQLNLQ8IYU4 475 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 CDRT4Q8N9R6 151 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 NUP43Q8NFH3 380 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 FBXO30Q8TB52 745 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 TCP10LQ8TDR4 215 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 GPR151Q8TDV0 419 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 MTERF3Q96E29 417 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 C1GALT1C1Q96EU7 318 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 PIGMQ9H3S5 423 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 GALNT8Q9NY28 637 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 NTMQ9P121 344 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 PACSIN3Q9UKS6 424 aa20.07■□□□□ 0.8
SCARB1-206ENST00000539320 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 TGM6O95932 706 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 EPXP11678 715 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 BCKDHAP12694 445 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 MAPK1P28482 360 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 MAP3K8P41279 467 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 IST1P53990 364 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 PRKAG1P54619 331 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 EEF1A1P68104 462 aaKnown RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 DAZAP2Q15038 168 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 UGT3A2Q3SY77 523 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 XKR7Q5GH72 579 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 EEF1A1P5Q5VTE0 462 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 EMBQ6PCB8 327 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 LUZP2Q86TE4 346 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 CDC20BQ86Y33 519 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 GOT1L1Q8NHS2 421 aaPredicted RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 LINC01560Q8TB33 94 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 AGR3Q8TD06 166 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 AENQ8WTP8 325 aaKnown RBP20.06■□□□□ 0.8
SCARB1-206ENST00000539320 DUSP19Q8WTR2 217 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 SLC9A6Q92581 669 aa20.06■□□□□ 0.8
SCARB1-206ENST00000539320 GIMAP5Q96F15 307 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms