RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZYG11AQ6WRX3 759 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 IKBIPQ70UQ0 350 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 TRIM46Q7Z4K8 759 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 CXorf67Q86X51 503 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 FAM76AQ8TAV0 307 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 ELP4Q96EB1 424 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 CCDC126Q96EE4 140 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 AMDHD1Q96NU7 426 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 PINK1Q9BXM7 581 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 TXLNGYQ9BZA5 131 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 RNF122Q9H9V4 155 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 KLHL28Q9NXS3 571 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 DCDC2Q9UHG0 476 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 EIF3LQ9Y262 564 aaKnown RBP11.28□□□□□ -0.6
VAMP1-206ENST00000538970 ZNF337Q9Y3M9 751 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 ZNF175Q9Y473 711 aa11.28□□□□□ -0.6
VAMP1-206ENST00000538970 DEFB108AA8MXU0 73 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 H3BML4 177 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 H3BQF6 201 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 LINC01387J3KSC0 135 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 SIAH2O43255 324 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 CTIFO43310 598 aaKnown RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 GLRA3O75311 464 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 TNFRSF21O75509 655 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 CGAP01215 116 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 FAM153BP0C7A2 387 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 MYL2P10916 166 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 CLDN20P56880 219 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 NAA20P61599 178 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 SIRPAP78324 504 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 NKX6-1P78426 367 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 SLC29A2Q14542 456 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 ZNHIT3Q15649 155 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 FAM153CQ494X1 144 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 NOXRED1Q6NXP6 359 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 BTLAQ7Z6A9 289 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 IFT20Q8IY31 132 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 CNPY4Q8N129 248 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 OR5M1Q8NGP8 315 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 FNDC9Q8TBE3 224 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 PGM2Q96G03 612 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF845Q96IR2 970 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 C18orf12Q96KH6 178 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 FAM111AQ96PZ2 611 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 PIGQQ9BRB3 760 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 PTGES2Q9H7Z7 377 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 TNFRSF12AQ9NP84 129 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 TBK1Q9UHD2 729 aa11.27□□□□□ -0.61
VAMP1-206ENST00000538970 MRTO4Q9UKD2 239 aaKnown RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 WBP11Q9Y2W2 641 aaKnown RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 NSD1Q96L73 2696 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-206ENST00000538970 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 A0A1W2PPM1 405 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 EMC8O43402 210 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 UTS2O95399 124 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 PROCP04070 461 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 CD8BP10966 210 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 POU2F1P14859 743 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 CRYGSP22914 178 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 PRPH2P23942 346 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 UGT2B10P36537 528 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 RFX3P48380 749 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 PSMD4P55036 377 aaKnown RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 OCRLQ01968 901 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 KIAA0040Q15053 153 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 PON3Q15166 354 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 GUSBP1Q15486 140 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 TMEM44Q2T9K0 475 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 GLYR1Q49A26 553 aaPredicted RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 SHEQ5VZ18 495 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 SH2D5Q6ZV89 423 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 CXXC5Q7LFL8 322 aaKnown RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 METTL25Q8N6Q8 603 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 DUSP19Q8WTR2 217 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 HOXB13Q92826 284 aaPredicted RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 MED18Q9BUE0 208 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 TBL1XR1Q9BZK7 514 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 RRAGDQ9NQL2 400 aaPredicted RBP11.26□□□□□ -0.61
VAMP1-206ENST00000538970 ELOVL5Q9NYP7 299 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 ZNF226Q9NYT6 803 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 CCL27Q9Y4X3 112 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
VAMP1-206ENST00000538970 GXYLT2A0PJZ3 443 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 NPIPB8E9PQR5 432 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PDPK1O15530 556 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 PLIN3O60664 434 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 CRCPO75575 148 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 KCNH1O95259 989 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 ANGPTL1O95841 491 aa11.25□□□□□ -0.61
VAMP1-206ENST00000538970 IGKV1D-16P01601 117 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms