RNA–Protein interactions for RNA: ENST00000538753.5

COPS7A-209, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-209ENST00000538753 NINJ1Q92982 152 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 CIDECQ96AQ7 238 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-209ENST00000538753 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
COPS7A-209ENST00000538753 APOPT1Q96IL0 206 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 RTN4RQ9BZR6 473 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 REEP4Q9H6H4 257 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 C3orf14Q9HBI5 128 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 MED11Q9P086 117 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 TMED5Q9Y3A6 229 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 DNAJC15Q9Y5T4 150 aa13.11□□□□□ -0.31
COPS7A-209ENST00000538753 LSM1O15116 133 aaKnown RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 AKAP10O43572 662 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 HCRTR2O43614 444 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 TGM6O95932 706 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 NUDT17P0C025 328 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 PRPS2P11908 318 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 PEPDP12955 493 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 HK1P19367 917 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 GABRA3P34903 492 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 GPC1P35052 558 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 MAP3K8P41279 467 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 CLK3P49761 638 aaKnown RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 RPL38P63173 70 aaKnown RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 EEF1A1P68104 462 aaKnown RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 STX5Q13190 355 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 UGT3A2Q3SY77 523 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ZNF385BQ569K4 471 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 MARCH3Q86UD3 253 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 TRABD2AQ86V40 505 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 CDC20BQ86Y33 519 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 GRAMD2AQ8IUY3 354 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 OR2W6PQ8NHA6 318 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 CEP70Q8NHQ1 597 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 GOT1L1Q8NHS2 421 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ZFP28Q8NHY6 868 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 LINC01560Q8TB33 94 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 DUSP19Q8WTR2 217 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 PPCDCQ96CD2 204 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ZBED6CLQ96FA7 236 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 TSSK3Q96PN8 268 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 RBM24Q9BX46 236 aaKnown RBP13.1□□□□□ -0.31
COPS7A-209ENST00000538753 LIME1Q9H400 295 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 PTGES2Q9H7Z7 377 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 EQTNQ9NQ60 294 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 NTMQ9P121 344 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 BAIAP2L1Q9UHR4 511 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ST6GALNAC2Q9UJ37 374 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 DSCAMO60469 2012 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 FREM1Q5H8C1 2179 aa13.1□□□□□ -0.31
COPS7A-209ENST00000538753 ARID1AO14497 2285 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 GXYLT2A0PJZ3 443 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 LINC01387J3KSC0 135 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 NPHS1O60500 1241 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 KCNH1O95259 989 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 UTS2O95399 124 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 CHRNGP07510 517 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 ASMTP46597 345 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 RFX3P48380 749 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 MANFP55145 182 aaKnown RBP13.09□□□□□ -0.31
COPS7A-209ENST00000538753 PRR5P85299 388 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 PDE7AQ13946 482 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 GALNTL6Q49A17 601 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 VPS26BQ4G0F5 336 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 ARL13AQ5H913 290 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-209ENST00000538753 RAET1LQ5VY80 246 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 CHMP1BQ7LBR1 199 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 LUZP2Q86TE4 346 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 CLHC1Q8NHS4 586 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 GPR151Q8TDV0 419 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 PIK3R3Q92569 461 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 MTERF3Q96E29 417 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 C1GALT1C1Q96EU7 318 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 FOXC2Q99958 501 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 MECRQ9BV79 373 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 PIGMQ9H3S5 423 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
COPS7A-209ENST00000538753 ACSS1Q9NUB1 689 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-209ENST00000538753 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
COPS7A-209ENST00000538753 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 SH3BP4Q9P0V3 963 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 SLC17A7Q9P2U7 560 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
COPS7A-209ENST00000538753 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.08□□□□□ -0.32
COPS7A-209ENST00000538753 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
COPS7A-209ENST00000538753 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
COPS7A-209ENST00000538753 SLC22A20A6NK97 555 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms