RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 BTN3A3O00478 584 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 HRO43593 1189 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 STXBP1P61764 594 aaKnown RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ST3GAL3Q11203 375 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 GNA13Q14344 377 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 TJAP1Q5JTD0 557 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 TMEM240Q5SV17 173 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 AADACL4Q5VUY2 407 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 DTX3Q8N9I9 347 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 NACC2Q96BF6 587 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SENP5Q96HI0 755 aaPredicted RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ZNF649Q9BS31 505 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 MED20Q9H944 212 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 B3GAT2Q9NPZ5 323 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 PHPT1Q9NRX4 125 aaPredicted RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 KNL1Q8NG31 2342 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ATP6V1E1P36543 226 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 CD83Q01151 205 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ID2Q02363 134 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 DMPKQ09013 629 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 AGERQ15109 404 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 RPE65Q16518 533 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SLC35F1Q5T1Q4 408 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 VASNQ6EMK4 673 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 PAMR1Q6UXH9 720 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 MARCH9Q86YJ5 346 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 KLBQ86Z14 1044 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SIRT6Q8N6T7 355 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SAMD8Q96LT4 415 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SECISBP2Q96T21 854 aaKnown RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 TBX5Q99593 518 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 PRRG3Q9BZD7 231 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ENKD1Q9H0I2 346 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 SLC7A7Q9UM01 511 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 EXOSC1Q9Y3B2 195 aaKnown RBP11.18□□□□□ -0.62
CPNE8-203ENST00000538596 ZNF780BQ9Y6R6 833 aa11.18□□□□□ -0.62
CPNE8-203ENST00000538596 GRXCR1A8MXD5 290 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 EIF2S1P05198 315 aaKnown RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ZNF888P0CJ79 500 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 FCARP24071 287 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 MYL9P24844 172 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 AHRP35869 848 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ANXA11P50995 505 aaKnown RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 FZD5Q13467 585 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 FRRS1Q6ZNA5 592 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 CPOQ8IVL8 374 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 TMEFF1Q8IYR6 380 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ARIH2OSQ8N7S6 290 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 POGLUT1Q8NBL1 392 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 OR51G2Q8NGK0 314 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ADAMTS15Q8TE58 950 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SLC41A3Q96GZ6 507 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 OR2B2Q9GZK3 357 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 HINT3Q9NQE9 182 aaKnown RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 PAQR5Q9NXK6 330 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 GSTK1Q9Y2Q3 226 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 A0A1W2PQU0 124 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SNTNA6NMZ2 147 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 CENPXA8MT69 81 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SYT5O00445 386 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 GABRPO00591 440 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 RGS13O14921 159 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SLC31A1O15431 190 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 GKN3PP0CG01 181 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 PRG2P13727 222 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 IFNGR2P38484 337 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 DDOSTP39656 456 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SIM1P81133 766 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 DUSP6Q16828 381 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 SMARCD3Q6STE5 483 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 VN1R4Q7Z5H5 301 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 Q8N402 240 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 GDPD1Q8N9F7 314 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 OR14C36Q8NHC7 312 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 NEIL3Q8TAT5 605 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ATF6BQ99941 703 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 MED18Q9BUE0 208 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 ACTRT3Q9BYD9 372 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 FGF22Q9HCT0 170 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 CBLCQ9ULV8 474 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 NOX1Q9Y5S8 564 aa11.17□□□□□ -0.62
CPNE8-203ENST00000538596 TRIOO75962 3097 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 NPIPA5A0A0B4J1W7 369 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 SYNDIG1LA6NDD5 238 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 NPIPA7E9PJI5 369 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 NPIPA8P0DM63 369 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
CPNE8-203ENST00000538596 AK4P27144 223 aaPredicted RBP11.16□□□□□ -0.62
CPNE8-203ENST00000538596 IGFALSP35858 605 aa11.16□□□□□ -0.62
CPNE8-203ENST00000538596 ERVK-21P61565 698 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms